Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
APOBEC1P41238 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.4□□□□□ -0.27
APOBEC1P41238 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.4□□□□□ -0.27
APOBEC1P41238 AC023908.3-201ENST00000564211 3047 ntBASIC13.39□□□□□ -0.27
APOBEC1P41238 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
APOBEC1P41238 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.39□□□□□ -0.27
APOBEC1P41238 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.39□□□□□ -0.27
APOBEC1P41238 AC026954.1-201ENST00000429771 1293 ntBASIC13.39□□□□□ -0.27
APOBEC1P41238 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.39□□□□□ -0.27
APOBEC1P41238 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.39□□□□□ -0.27
APOBEC1P41238 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.39□□□□□ -0.27
APOBEC1P41238 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.39□□□□□ -0.27
APOBEC1P41238 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.39□□□□□ -0.27
APOBEC1P41238 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.39□□□□□ -0.27
APOBEC1P41238 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.39□□□□□ -0.27
APOBEC1P41238 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.39□□□□□ -0.27
APOBEC1P41238 MIR4683-201ENST00000579659 81 ntBASIC13.39□□□□□ -0.27
APOBEC1P41238 PPY2P-201ENST00000582808 702 ntBASIC13.39□□□□□ -0.27
APOBEC1P41238 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.39□□□□□ -0.27
APOBEC1P41238 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.39□□□□□ -0.27
APOBEC1P41238 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 KRT8P4-201ENST00000509735 1454 ntBASIC13.39□□□□□ -0.27
APOBEC1P41238 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.39□□□□□ -0.27
APOBEC1P41238 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOBEC1P41238 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.39□□□□□ -0.27
APOBEC1P41238 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBEC1P41238 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.39□□□□□ -0.27
APOBEC1P41238 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.39□□□□□ -0.27
APOBEC1P41238 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
APOBEC1P41238 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
APOBEC1P41238 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.38□□□□□ -0.27
APOBEC1P41238 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.38□□□□□ -0.27
APOBEC1P41238 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.38□□□□□ -0.27
APOBEC1P41238 CHMP1AP1-201ENST00000445563 662 ntBASIC13.38□□□□□ -0.27
APOBEC1P41238 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 AC017083.2-201ENST00000608069 979 ntBASIC13.38□□□□□ -0.27
APOBEC1P41238 AC133552.6-201ENST00000613406 534 ntBASIC13.38□□□□□ -0.27
APOBEC1P41238 MIR6775-201ENST00000617557 69 ntBASIC13.38□□□□□ -0.27
APOBEC1P41238 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.38□□□□□ -0.27
APOBEC1P41238 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
APOBEC1P41238 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
APOBEC1P41238 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms