Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.98□□□□□ -0.33
GDNFP39905 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.98□□□□□ -0.33
GDNFP39905 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.98□□□□□ -0.33
GDNFP39905 AC015910.1-201ENST00000579400 975 ntBASIC12.98□□□□□ -0.33
GDNFP39905 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 AL390955.2-201ENST00000603032 514 ntBASIC12.98□□□□□ -0.33
GDNFP39905 AL844908.2-201ENST00000609461 460 ntBASIC12.98□□□□□ -0.33
GDNFP39905 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.98□□□□□ -0.33
GDNFP39905 MIR6069-201ENST00000620069 79 ntBASIC12.98□□□□□ -0.33
GDNFP39905 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.98□□□□□ -0.33
GDNFP39905 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GDNFP39905 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GDNFP39905 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GDNFP39905 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
GDNFP39905 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.98□□□□□ -0.33
GDNFP39905 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GDNFP39905 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.98□□□□□ -0.33
GDNFP39905 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 AC083964.2-201ENST00000623988 2396 ntBASIC12.98□□□□□ -0.33
GDNFP39905 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 AC100757.3-201ENST00000622361 1406 ntBASIC12.97□□□□□ -0.33
GDNFP39905 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.97□□□□□ -0.33
GDNFP39905 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.97□□□□□ -0.33
GDNFP39905 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.97□□□□□ -0.33
GDNFP39905 AC004945.1-201ENST00000416738 983 ntBASIC12.97□□□□□ -0.33
GDNFP39905 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.97□□□□□ -0.33
GDNFP39905 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 SERBP1P3-201ENST00000459980 809 ntBASIC12.97□□□□□ -0.33
GDNFP39905 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.97□□□□□ -0.33
GDNFP39905 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.97□□□□□ -0.33
GDNFP39905 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 IGHV3-42-201ENST00000520410 361 ntBASIC12.97□□□□□ -0.33
GDNFP39905 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.97□□□□□ -0.33
GDNFP39905 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.97□□□□□ -0.33
GDNFP39905 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.97□□□□□ -0.33
GDNFP39905 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 AL158211.3-201ENST00000607385 239 ntBASIC12.97□□□□□ -0.33
GDNFP39905 AL590560.3-201ENST00000623350 461 ntBASIC12.97□□□□□ -0.33
GDNFP39905 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GDNFP39905 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
GDNFP39905 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
GDNFP39905 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
GDNFP39905 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.97□□□□□ -0.33
GDNFP39905 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GDNFP39905 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
GDNFP39905 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms