Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.97■□□□□ 0.47
TM4SF1P30408 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.97■□□□□ 0.47
TM4SF1P30408 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TM4SF1P30408 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TM4SF1P30408 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.97■□□□□ 0.47
TM4SF1P30408 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TM4SF1P30408 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TM4SF1P30408 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.97■□□□□ 0.47
TM4SF1P30408 PAUPAR-201ENST00000630360 2965 ntBASIC17.97■□□□□ 0.47
TM4SF1P30408 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.97■□□□□ 0.47
TM4SF1P30408 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TM4SF1P30408 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TM4SF1P30408 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.96■□□□□ 0.47
TM4SF1P30408 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TM4SF1P30408 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TM4SF1P30408 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TM4SF1P30408 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.96■□□□□ 0.47
TM4SF1P30408 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TM4SF1P30408 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.96■□□□□ 0.47
TM4SF1P30408 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 AC006529.1-201ENST00000459978 637 ntBASIC17.96■□□□□ 0.47
TM4SF1P30408 AC063952.3-201ENST00000467756 308 ntBASIC17.96■□□□□ 0.47
TM4SF1P30408 AC026470.1-201ENST00000478038 846 ntBASIC17.96■□□□□ 0.47
TM4SF1P30408 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.96■□□□□ 0.47
TM4SF1P30408 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.96■□□□□ 0.47
TM4SF1P30408 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.96■□□□□ 0.47
TM4SF1P30408 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.96■□□□□ 0.47
TM4SF1P30408 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TM4SF1P30408 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.96■□□□□ 0.47
TM4SF1P30408 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.96■□□□□ 0.47
TM4SF1P30408 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.96■□□□□ 0.47
TM4SF1P30408 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.96■□□□□ 0.47
TM4SF1P30408 AC010976.2-201ENST00000609697 852 ntBASIC17.96■□□□□ 0.47
TM4SF1P30408 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.96■□□□□ 0.47
TM4SF1P30408 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.96■□□□□ 0.47
TM4SF1P30408 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TM4SF1P30408 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TM4SF1P30408 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF1P30408 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.96■□□□□ 0.47
TM4SF1P30408 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TM4SF1P30408 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.95■□□□□ 0.46
TM4SF1P30408 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF1P30408 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
TM4SF1P30408 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.95■□□□□ 0.46
TM4SF1P30408 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF1P30408 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.95■□□□□ 0.46
TM4SF1P30408 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.95■□□□□ 0.46
TM4SF1P30408 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.95■□□□□ 0.46
TM4SF1P30408 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.95■□□□□ 0.46
TM4SF1P30408 KRT8P2-201ENST00000556193 944 ntBASIC17.95■□□□□ 0.46
TM4SF1P30408 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF1P30408 AC027139.1-201ENST00000565286 951 ntBASIC17.95■□□□□ 0.46
TM4SF1P30408 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF1P30408 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.95■□□□□ 0.46
TM4SF1P30408 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.95■□□□□ 0.46
TM4SF1P30408 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.95■□□□□ 0.46
TM4SF1P30408 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TM4SF1P30408 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF1P30408 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF1P30408 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF1P30408 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.95■□□□□ 0.46
TM4SF1P30408 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF1P30408 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.94■□□□□ 0.46
TM4SF1P30408 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms