Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.07■□□□□ 0
NFKB1P19838 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.07■□□□□ 0
NFKB1P19838 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
NFKB1P19838 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NFKB1P19838 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NFKB1P19838 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.07■□□□□ 0
NFKB1P19838 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.07■□□□□ 0
NFKB1P19838 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.07■□□□□ 0
NFKB1P19838 CROCCP4-201ENST00000457096 498 ntBASIC15.07■□□□□ 0
NFKB1P19838 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.07■□□□□ 0
NFKB1P19838 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.07■□□□□ 0
NFKB1P19838 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.07■□□□□ 0
NFKB1P19838 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.07■□□□□ 0
NFKB1P19838 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NFKB1P19838 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.07■□□□□ 0
NFKB1P19838 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.07■□□□□ 0
NFKB1P19838 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.07■□□□□ 0
NFKB1P19838 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.07■□□□□ 0
NFKB1P19838 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NFKB1P19838 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.07■□□□□ 0
NFKB1P19838 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 AL354989.2-201ENST00000435838 1540 ntBASIC15.07■□□□□ 0
NFKB1P19838 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.07■□□□□ 0
NFKB1P19838 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NFKB1P19838 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.06■□□□□ 0
NFKB1P19838 AC006504.5-208ENST00000588784 2401 ntBASIC15.06■□□□□ 0
NFKB1P19838 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 AC004945.1-201ENST00000416738 983 ntBASIC15.06■□□□□ 0
NFKB1P19838 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NFKB1P19838 KRT43P-201ENST00000434019 910 ntBASIC15.06■□□□□ 0
NFKB1P19838 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.06■□□□□ 0
NFKB1P19838 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.06■□□□□ 0
NFKB1P19838 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.06■□□□□ 0
NFKB1P19838 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
NFKB1P19838 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.06■□□□□ 0
NFKB1P19838 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 MIR4683-201ENST00000579659 81 ntBASIC15.06■□□□□ 0
NFKB1P19838 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.06■□□□□ 0
NFKB1P19838 BX088702.1-201ENST00000610784 235 ntBASIC15.06■□□□□ 0
NFKB1P19838 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 AC006453.4-201ENST00000636949 1252 ntBASIC15.06■□□□□ 0
NFKB1P19838 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.06■□□□□ 0
NFKB1P19838 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NFKB1P19838 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NFKB1P19838 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.06■□□□□ 0
NFKB1P19838 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NFKB1P19838 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NFKB1P19838 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms