Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
NR1H2P55055 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H2P55055 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H2P55055 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H2P55055 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 CICP16-201ENST00000502609 2813 ntBASIC14.17□□□□□ -0.14
NR1H2P55055 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H2P55055 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR1H2P55055 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.16□□□□□ -0.14
NR1H2P55055 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 AL118506.1-201ENST00000601296 3082 ntBASIC14.16□□□□□ -0.14
NR1H2P55055 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NR1H2P55055 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
NR1H2P55055 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
NR1H2P55055 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NR1H2P55055 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
NR1H2P55055 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NR1H2P55055 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H2P55055 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR1H2P55055 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.16□□□□□ -0.14
NR1H2P55055 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H2P55055 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.16□□□□□ -0.14
NR1H2P55055 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H2P55055 TSSK5P-201ENST00000423978 907 ntBASIC14.16□□□□□ -0.14
NR1H2P55055 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.16□□□□□ -0.14
NR1H2P55055 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H2P55055 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.16□□□□□ -0.14
NR1H2P55055 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.16□□□□□ -0.14
NR1H2P55055 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H2P55055 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 AC105021.1-202ENST00000570572 669 ntBASIC14.16□□□□□ -0.14
NR1H2P55055 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H2P55055 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H2P55055 RN7SL828P-201ENST00000607615 303 ntBASIC14.16□□□□□ -0.14
NR1H2P55055 AC004233.3-201ENST00000607794 1269 ntBASIC14.16□□□□□ -0.14
NR1H2P55055 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NR1H2P55055 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NR1H2P55055 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H2P55055 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NR1H2P55055 AC087499.5-201ENST00000452760 1342 ntBASIC14.15□□□□□ -0.14
NR1H2P55055 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.15□□□□□ -0.14
NR1H2P55055 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.15□□□□□ -0.14
NR1H2P55055 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.15□□□□□ -0.14
NR1H2P55055 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms