Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PTX3P26022 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PTX3P26022 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PTX3P26022 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.26□□□□□ -0.13
PTX3P26022 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.26□□□□□ -0.13
PTX3P26022 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTX3P26022 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PTX3P26022 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 AC097359.2-201ENST00000604992 2389 ntBASIC14.25□□□□□ -0.13
PTX3P26022 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 AC126335.2-201ENST00000623362 4637 ntBASIC14.25□□□□□ -0.13
PTX3P26022 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 AC092933.1-201ENST00000393644 945 ntBASIC14.25□□□□□ -0.13
PTX3P26022 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 BCRP2-202ENST00000447763 634 ntBASIC14.25□□□□□ -0.13
PTX3P26022 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 BCRP6-201ENST00000510112 632 ntBASIC14.25□□□□□ -0.13
PTX3P26022 BCRP7-201ENST00000511549 544 ntBASIC14.25□□□□□ -0.13
PTX3P26022 RNA5SP486-201ENST00000515961 83 ntBASIC14.25□□□□□ -0.13
PTX3P26022 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.25□□□□□ -0.13
PTX3P26022 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.25□□□□□ -0.13
PTX3P26022 AC132938.2-201ENST00000579188 680 ntBASIC14.25□□□□□ -0.13
PTX3P26022 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.25□□□□□ -0.13
PTX3P26022 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 AC233724.13-201ENST00000598383 410 ntBASIC14.25□□□□□ -0.13
PTX3P26022 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 AL591163.1-201ENST00000641757 987 ntBASIC14.25□□□□□ -0.13
PTX3P26022 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 AC006504.5-208ENST00000588784 2401 ntBASIC14.25□□□□□ -0.13
PTX3P26022 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.25□□□□□ -0.13
PTX3P26022 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PTX3P26022 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
PTX3P26022 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTX3P26022 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTX3P26022 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTX3P26022 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTX3P26022 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.24□□□□□ -0.13
PTX3P26022 AL359881.3-201ENST00000602640 1721 ntBASIC14.24□□□□□ -0.13
PTX3P26022 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PTX3P26022 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTX3P26022 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PTX3P26022 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTX3P26022 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTX3P26022 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms