Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
APOEP02649 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.59■□□□□ 0.09
APOEP02649 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
APOEP02649 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
APOEP02649 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
APOEP02649 FKBP4P6-201ENST00000457486 1332 ntBASIC15.59■□□□□ 0.09
APOEP02649 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
APOEP02649 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
APOEP02649 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.59■□□□□ 0.09
APOEP02649 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.59■□□□□ 0.09
APOEP02649 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
APOEP02649 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
APOEP02649 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
APOEP02649 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.59■□□□□ 0.09
APOEP02649 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
APOEP02649 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
APOEP02649 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.58■□□□□ 0.09
APOEP02649 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
APOEP02649 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
APOEP02649 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.58■□□□□ 0.09
APOEP02649 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
APOEP02649 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.58■□□□□ 0.09
APOEP02649 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
APOEP02649 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
APOEP02649 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
APOEP02649 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.58■□□□□ 0.08
APOEP02649 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.58■□□□□ 0.08
APOEP02649 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.58■□□□□ 0.08
APOEP02649 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.58■□□□□ 0.08
APOEP02649 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.58■□□□□ 0.08
APOEP02649 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.58■□□□□ 0.08
APOEP02649 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.58■□□□□ 0.08
APOEP02649 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
APOEP02649 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 BNIP3P42-201ENST00000454982 569 ntBASIC15.58■□□□□ 0.08
APOEP02649 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 COX5BP1-201ENST00000507622 393 ntBASIC15.58■□□□□ 0.08
APOEP02649 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
APOEP02649 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 AC106820.3-201ENST00000561653 397 ntBASIC15.58■□□□□ 0.08
APOEP02649 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 BNIP3P29-201ENST00000598302 571 ntBASIC15.58■□□□□ 0.08
APOEP02649 AC011447.5-201ENST00000616168 564 ntBASIC15.58■□□□□ 0.08
APOEP02649 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.58■□□□□ 0.08
APOEP02649 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.58■□□□□ 0.08
APOEP02649 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
APOEP02649 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
APOEP02649 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
APOEP02649 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
APOEP02649 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
APOEP02649 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APOEP02649 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.58■□□□□ 0.08
APOEP02649 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.58■□□□□ 0.08
APOEP02649 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
APOEP02649 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.57■□□□□ 0.08
APOEP02649 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
APOEP02649 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.57■□□□□ 0.08
APOEP02649 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
APOEP02649 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
APOEP02649 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
APOEP02649 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.57■□□□□ 0.08
APOEP02649 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.57■□□□□ 0.08
APOEP02649 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.57■□□□□ 0.08
APOEP02649 TLE1P1-201ENST00000422965 589 ntBASIC15.57■□□□□ 0.08
APOEP02649 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 RPS2P32-201ENST00000439199 892 ntBASIC15.57■□□□□ 0.08
APOEP02649 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.57■□□□□ 0.08
APOEP02649 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APOEP02649 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.57■□□□□ 0.08
APOEP02649 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.57■□□□□ 0.08
APOEP02649 AL391280.1-201ENST00000506969 1062 ntBASIC15.57■□□□□ 0.08
APOEP02649 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
APOEP02649 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
APOEP02649 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.57■□□□□ 0.08
APOEP02649 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
APOEP02649 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms