Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 FAM197Y7-201ENST00000432892 766 ntBASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 C2orf27AP3-201ENST00000434123 579 ntBASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 GCOM2-201ENST00000509133 1104 ntBASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 LINC02084-201ENST00000606069 1096 ntBASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 AL354718.3-201ENST00000616414 581 ntBASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 CR382287.1-201ENST00000623954 586 ntBASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 MRPL37P1-201ENST00000592451 1337 ntBASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 AC097376.2-205ENST00000610159 5334 ntBASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 AC016694.1-201ENST00000434179 700 ntBASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 RNA5SP486-201ENST00000515961 83 ntBASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 AC005225.4-201ENST00000557330 545 ntBASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms