Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 PTGER4P2-201ENST00000328411 252 ntBASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 PTGER4P3-201ENST00000458150 252 ntBASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 AL031673.1-201ENST00000611460 466 ntBASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 RARS-210ENST00000626454 177 ntTSL 5 BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
BIVM-ERCC5R4GMW8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
BIVM-ERCC5R4GMW8 AL109809.1-201ENST00000418979 1367 ntBASIC23.83■■□□□ 1.4
BIVM-ERCC5R4GMW8 DUT-208ENST00000559540 1441 ntTSL 2 BASIC23.83■■□□□ 1.4
BIVM-ERCC5R4GMW8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC105917.1-201ENST00000506637 2539 ntBASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC011498.7-201ENST00000624986 2027 ntBASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC023157.3-201ENST00000619086 2088 ntBASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 RN7SL582P-201ENST00000491078 279 ntBASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 MIR4265-201ENST00000582152 99 ntBASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC020763.4-201ENST00000623414 4170 ntBASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC090505.1-201ENST00000430515 1834 ntBASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 AL365181.1-201ENST00000564032 1828 ntBASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC23.82■■□□□ 1.4
BIVM-ERCC5R4GMW8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 BPIFB5P-201ENST00000457066 1099 ntBASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 SRP14-204ENST00000558720 780 ntTSL 2 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC022080.1-201ENST00000366255 781 ntBASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 DDX39AP1-201ENST00000445147 1181 ntBASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 CYP4F36P-201ENST00000589193 186 ntBASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 AL136982.5-201ENST00000605222 294 ntBASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC23.81■■□□□ 1.4
BIVM-ERCC5R4GMW8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 RBM4-207ENST00000506523 654 ntTSL 3 BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC027139.1-201ENST00000565286 951 ntBASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
BIVM-ERCC5R4GMW8 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms