Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 APRT-204ENST00000563655 709 ntTSL 5 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 AL049840.4-201ENST00000602422 811 ntBASIC9.96□□□□□ -0.82
SCXQ7RTU7 AL022328.1-201ENST00000610050 478 ntBASIC9.96□□□□□ -0.82
SCXQ7RTU7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC9.96□□□□□ -0.82
SCXQ7RTU7 MIR6799-201ENST00000620297 69 ntBASIC9.96□□□□□ -0.82
SCXQ7RTU7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AC005562.1-201ENST00000583030 3219 ntBASIC9.95□□□□□ -0.82
SCXQ7RTU7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 C1QBPP1-201ENST00000400117 770 ntBASIC9.95□□□□□ -0.82
SCXQ7RTU7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 VDAC1P7-201ENST00000462417 847 ntBASIC9.95□□□□□ -0.82
SCXQ7RTU7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 SLC25A47P1-201ENST00000531577 414 ntBASIC9.95□□□□□ -0.82
SCXQ7RTU7 PTP4A1P2-201ENST00000546033 454 ntBASIC9.95□□□□□ -0.82
SCXQ7RTU7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AC124283.3-201ENST00000570869 594 ntBASIC9.95□□□□□ -0.82
SCXQ7RTU7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms