Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 AL139384.1-201ENST00000612143 3047 ntBASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AL109809.1-201ENST00000418979 1367 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AC020931.1-201ENST00000589622 1346 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AC010900.1-201ENST00000449849 1296 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AL451000.1-201ENST00000451300 1186 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AC092612.1-201ENST00000514501 998 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 RNA5SP406-201ENST00000516106 112 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AL603832.2-201ENST00000566195 2125 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 AC025183.3-201ENST00000623526 1482 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 MTHFR-217ENST00000641820 1569 ntBASIC14.22□□□□□ -0.13
RSPO4Q2I0M5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 RN7SL530P-201ENST00000485097 298 ntBASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 ALG1L3P-201ENST00000503331 765 ntBASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 AC093826.1-201ENST00000508655 993 ntBASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.21□□□□□ -0.13
RSPO4Q2I0M5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RSPO4Q2I0M5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RSPO4Q2I0M5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
RSPO4Q2I0M5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RSPO4Q2I0M5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms