Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1DP48730 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CSNK1DP48730 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CSNK1DP48730 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1DP48730 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1DP48730 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.79□□□□□ -0.04
CSNK1DP48730 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1DP48730 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1DP48730 KRT8P13-201ENST00000463294 1010 ntBASIC14.79□□□□□ -0.04
CSNK1DP48730 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1DP48730 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CSNK1DP48730 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1DP48730 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1DP48730 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1DP48730 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.79□□□□□ -0.04
CSNK1DP48730 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CSNK1DP48730 AC005962.1-201ENST00000584100 773 ntBASIC14.79□□□□□ -0.04
CSNK1DP48730 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 AC020907.1-201ENST00000616460 1350 ntBASIC14.79□□□□□ -0.04
CSNK1DP48730 AL136295.7-201ENST00000619226 1200 ntBASIC14.79□□□□□ -0.04
CSNK1DP48730 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.79□□□□□ -0.04
CSNK1DP48730 AC140479.7-201ENST00000636301 2332 ntBASIC14.79□□□□□ -0.04
CSNK1DP48730 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
CSNK1DP48730 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CSNK1DP48730 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1DP48730 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CSNK1DP48730 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CSNK1DP48730 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CSNK1DP48730 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
CSNK1DP48730 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CSNK1DP48730 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1DP48730 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1DP48730 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1DP48730 FAM90A7P-201ENST00000382628 1395 ntBASIC14.78□□□□□ -0.04
CSNK1DP48730 FAM90A23P-201ENST00000400136 1395 ntBASIC14.78□□□□□ -0.04
CSNK1DP48730 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.78□□□□□ -0.04
CSNK1DP48730 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.78□□□□□ -0.04
CSNK1DP48730 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1DP48730 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1DP48730 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1DP48730 AC106794.1-201ENST00000506935 792 ntBASIC14.78□□□□□ -0.04
CSNK1DP48730 AC005740.2-201ENST00000511085 419 ntBASIC14.78□□□□□ -0.04
CSNK1DP48730 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.78□□□□□ -0.04
CSNK1DP48730 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CSNK1DP48730 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1DP48730 MIR4525-201ENST00000580000 75 ntBASIC14.78□□□□□ -0.04
CSNK1DP48730 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CSNK1DP48730 AC133540.1-201ENST00000620845 1019 ntBASIC14.78□□□□□ -0.04
CSNK1DP48730 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CSNK1DP48730 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1DP48730 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1DP48730 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1DP48730 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1DP48730 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1DP48730 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1DP48730 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1DP48730 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1DP48730 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.77□□□□□ -0.04
CSNK1DP48730 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.77□□□□□ -0.04
CSNK1DP48730 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms