Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
NDUFA1O15239 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
NDUFA1O15239 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
NDUFA1O15239 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.22□□□□□ -0.77
NDUFA1O15239 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 CSPG4P11-201ENST00000560634 4910 ntBASIC10.22□□□□□ -0.77
NDUFA1O15239 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
NDUFA1O15239 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.22□□□□□ -0.77
NDUFA1O15239 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.22□□□□□ -0.77
NDUFA1O15239 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.22□□□□□ -0.77
NDUFA1O15239 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.22□□□□□ -0.77
NDUFA1O15239 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
NDUFA1O15239 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.22□□□□□ -0.77
NDUFA1O15239 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC10.22□□□□□ -0.77
NDUFA1O15239 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC10.22□□□□□ -0.77
NDUFA1O15239 AP001059.3-201ENST00000619053 235 ntBASIC10.22□□□□□ -0.77
NDUFA1O15239 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.22□□□□□ -0.77
NDUFA1O15239 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.22□□□□□ -0.77
NDUFA1O15239 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.22□□□□□ -0.77
NDUFA1O15239 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NDUFA1O15239 AC005562.1-201ENST00000583030 3219 ntBASIC10.22□□□□□ -0.77
NDUFA1O15239 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.22□□□□□ -0.77
NDUFA1O15239 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.21□□□□□ -0.77
NDUFA1O15239 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.21□□□□□ -0.77
NDUFA1O15239 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
NDUFA1O15239 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
NDUFA1O15239 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC10.21□□□□□ -0.77
NDUFA1O15239 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 AC023794.5-201ENST00000564380 2157 ntBASIC10.21□□□□□ -0.77
NDUFA1O15239 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
NDUFA1O15239 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NDUFA1O15239 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms