Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AL138799.1-201ENST00000448213 1675 ntBASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 ACTBP11-201ENST00000436287 1126 ntBASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 KRT90P-201ENST00000549264 1064 ntBASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 DUX4L45-201ENST00000566406 1057 ntBASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AC132938.4-201ENST00000623835 848 ntBASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AC008687.7-202ENST00000637404 953 ntBASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 AL928921.2-201ENST00000641325 2442 ntBASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 YBX1P6-201ENST00000442962 1002 ntBASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 FAM8A2P-201ENST00000528813 1142 ntBASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 AC025279.2-201ENST00000569730 653 ntBASIC14.14□□□□□ -0.15
PCDHGB6Q9Y5F9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms