Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC009145.4-201ENST00000625119 1294 ntBASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 PSME2-218ENST00000630027 185 ntTSL 3 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 WASH3P-207ENST00000560956 1394 ntBASIC12.27□□□□□ -0.44
CCDC168Q8NDH2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 AL513523.2-202ENST00000427283 2040 ntBASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 AHCYP4-201ENST00000419201 1315 ntBASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 AC106827.1-201ENST00000366454 431 ntBASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 RN7SL23P-201ENST00000484055 275 ntBASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 AC090136.2-201ENST00000517809 420 ntBASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 AC084262.1-201ENST00000567818 751 ntBASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC168Q8NDH2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 PTGER4P2-201ENST00000328411 252 ntBASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 ERP29P1-201ENST00000442902 706 ntBASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 PTGER4P3-201ENST00000458150 252 ntBASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 AC013553.1-201ENST00000560906 267 ntBASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 AC010632.2-201ENST00000588369 1224 ntBASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms