Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE6BP35913 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6BP35913 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDE6BP35913 AL136172.1-201ENST00000598590 1394 ntBASIC18.07■□□□□ 0.48
PDE6BP35913 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 ST13P19-201ENST00000442505 1124 ntBASIC18.07■□□□□ 0.48
PDE6BP35913 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.07■□□□□ 0.48
PDE6BP35913 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.07■□□□□ 0.48
PDE6BP35913 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.07■□□□□ 0.48
PDE6BP35913 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.07■□□□□ 0.48
PDE6BP35913 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.07■□□□□ 0.48
PDE6BP35913 DRG2-220ENST00000583355 891 ntTSL 3 BASIC18.07■□□□□ 0.48
PDE6BP35913 MIR2392-201ENST00000584881 84 ntBASIC18.07■□□□□ 0.48
PDE6BP35913 AC140113.1-201ENST00000603467 169 ntBASIC18.07■□□□□ 0.48
PDE6BP35913 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.07■□□□□ 0.48
PDE6BP35913 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDE6BP35913 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6BP35913 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDE6BP35913 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.07■□□□□ 0.48
PDE6BP35913 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6BP35913 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDE6BP35913 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6BP35913 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6BP35913 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.06■□□□□ 0.48
PDE6BP35913 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDE6BP35913 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDE6BP35913 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE6BP35913 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 AC020658.6-201ENST00000623564 1870 ntBASIC18.06■□□□□ 0.48
PDE6BP35913 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.06■□□□□ 0.48
PDE6BP35913 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 DNM1P51-201ENST00000558149 522 ntBASIC18.06■□□□□ 0.48
PDE6BP35913 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.06■□□□□ 0.48
PDE6BP35913 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 AL451007.2-201ENST00000632004 563 ntBASIC18.06■□□□□ 0.48
PDE6BP35913 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
PDE6BP35913 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 AC023024.2-201ENST00000623561 1993 ntBASIC18.06■□□□□ 0.48
PDE6BP35913 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6BP35913 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE6BP35913 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6BP35913 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
PDE6BP35913 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 AC092135.3-201ENST00000624151 1846 ntBASIC18.05■□□□□ 0.48
PDE6BP35913 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDE6BP35913 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6BP35913 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDE6BP35913 RN7SKP109-201ENST00000410592 316 ntBASIC18.05■□□□□ 0.48
PDE6BP35913 RPL35P9-201ENST00000446059 350 ntBASIC18.05■□□□□ 0.48
PDE6BP35913 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 RN7SL277P-201ENST00000481521 288 ntBASIC18.05■□□□□ 0.48
PDE6BP35913 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms