Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 AC015909.3-201ENST00000572855 1794 ntBASIC14.26□□□□□ -0.13
CLDN6P56747 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 AC025271.4-201ENST00000621477 1726 ntBASIC14.26□□□□□ -0.13
CLDN6P56747 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CLDN6P56747 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CLDN6P56747 AC006058.4-201ENST00000624016 1670 ntBASIC14.26□□□□□ -0.13
CLDN6P56747 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN6P56747 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLDN6P56747 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLDN6P56747 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN6P56747 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN6P56747 POU5F1P2-201ENST00000521750 823 ntBASIC14.25□□□□□ -0.13
CLDN6P56747 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CLDN6P56747 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN6P56747 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN6P56747 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN6P56747 AC127024.7-201ENST00000625101 200 ntBASIC14.25□□□□□ -0.13
CLDN6P56747 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 AL365209.1-201ENST00000624418 6473 ntBASIC14.25□□□□□ -0.13
CLDN6P56747 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN6P56747 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN6P56747 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN6P56747 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN6P56747 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN6P56747 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CLDN6P56747 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN6P56747 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLDN6P56747 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CLDN6P56747 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN6P56747 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN6P56747 AC012441.2-201ENST00000444843 739 ntBASIC14.24□□□□□ -0.13
CLDN6P56747 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CLDN6P56747 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CLDN6P56747 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.24□□□□□ -0.13
CLDN6P56747 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 MIR6720-201ENST00000611664 98 ntBASIC14.24□□□□□ -0.13
CLDN6P56747 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms