Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 U73169.1-201ENST00000395152 367 ntBASIC24.65■■□□□ 1.54
CUX2O14529 OR8T1P-201ENST00000421347 918 ntBASIC24.65■■□□□ 1.54
CUX2O14529 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CUX2O14529 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC24.65■■□□□ 1.54
CUX2O14529 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC24.65■■□□□ 1.54
CUX2O14529 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC24.65■■□□□ 1.54
CUX2O14529 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC24.65■■□□□ 1.54
CUX2O14529 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 REXO1L2P-201ENST00000425429 2069 ntBASIC24.65■■□□□ 1.54
CUX2O14529 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 FAM226B-201ENST00000602508 1490 ntBASIC24.65■■□□□ 1.54
CUX2O14529 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC24.65■■□□□ 1.54
CUX2O14529 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC24.65■■□□□ 1.54
CUX2O14529 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CUX2O14529 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC24.65■■□□□ 1.54
CUX2O14529 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC24.64■■□□□ 1.54
CUX2O14529 AC095040.1-201ENST00000513286 675 ntBASIC24.64■■□□□ 1.54
CUX2O14529 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC24.64■■□□□ 1.54
CUX2O14529 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC24.64■■□□□ 1.54
CUX2O14529 IFNL3P1-201ENST00000595082 501 ntBASIC24.64■■□□□ 1.54
CUX2O14529 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CUX2O14529 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CUX2O14529 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CUX2O14529 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CUX2O14529 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CUX2O14529 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CUX2O14529 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC24.64■■□□□ 1.54
CUX2O14529 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC24.64■■□□□ 1.54
CUX2O14529 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CUX2O14529 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.54
CUX2O14529 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CUX2O14529 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC24.64■■□□□ 1.53
CUX2O14529 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC24.64■■□□□ 1.53
CUX2O14529 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC24.64■■□□□ 1.53
CUX2O14529 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CUX2O14529 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
CUX2O14529 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
CUX2O14529 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CUX2O14529 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC24.64■■□□□ 1.53
CUX2O14529 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CUX2O14529 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
CUX2O14529 RN7SKP212-201ENST00000410851 328 ntBASIC24.64■■□□□ 1.53
CUX2O14529 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CUX2O14529 AC092903.1-201ENST00000466506 262 ntBASIC24.64■■□□□ 1.53
CUX2O14529 RN7SL523P-201ENST00000484401 298 ntBASIC24.64■■□□□ 1.53
CUX2O14529 CD164-210ENST00000512821 964 ntTSL 2 BASIC24.64■■□□□ 1.53
CUX2O14529 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC24.64■■□□□ 1.53
CUX2O14529 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC24.64■■□□□ 1.53
CUX2O14529 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC24.64■■□□□ 1.53
CUX2O14529 CES1P2-201ENST00000566467 1242 ntBASIC24.64■■□□□ 1.53
CUX2O14529 COQ4-204ENST00000608951 781 ntTSL 2 BASIC24.64■■□□□ 1.53
CUX2O14529 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CUX2O14529 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC24.63■■□□□ 1.53
CUX2O14529 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 AP000845.1-201ENST00000581677 2131 ntBASIC24.63■■□□□ 1.53
CUX2O14529 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC24.63■■□□□ 1.53
CUX2O14529 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 SHMT1P1-201ENST00000419974 1312 ntBASIC24.63■■□□□ 1.53
CUX2O14529 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC24.63■■□□□ 1.53
CUX2O14529 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CUX2O14529 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 PPP1R2P4-201ENST00000424051 595 ntBASIC24.63■■□□□ 1.53
CUX2O14529 FAM86JP-202ENST00000484500 988 ntBASIC24.63■■□□□ 1.53
CUX2O14529 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC24.63■■□□□ 1.53
CUX2O14529 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC24.63■■□□□ 1.53
CUX2O14529 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC24.63■■□□□ 1.53
CUX2O14529 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC24.63■■□□□ 1.53
CUX2O14529 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CUX2O14529 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC24.63■■□□□ 1.53
CUX2O14529 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CUX2O14529 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CUX2O14529 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC24.62■■□□□ 1.53
CUX2O14529 AL590440.2-201ENST00000641973 1595 ntBASIC24.62■■□□□ 1.53
CUX2O14529 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CUX2O14529 PCDHB19P-201ENST00000570871 2371 ntBASIC24.62■■□□□ 1.53
CUX2O14529 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CUX2O14529 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CUX2O14529 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC24.62■■□□□ 1.53
CUX2O14529 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CUX2O14529 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC24.62■■□□□ 1.53
CUX2O14529 AP000244.1-201ENST00000424582 201 ntBASIC24.62■■□□□ 1.53
CUX2O14529 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC24.62■■□□□ 1.53
CUX2O14529 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC24.62■■□□□ 1.53
CUX2O14529 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC24.62■■□□□ 1.53
CUX2O14529 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms