Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 FAM197Y7-201ENST00000432892 766 ntBASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 Z93015.1-201ENST00000451718 390 ntBASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 AC120057.1-201ENST00000483947 663 ntBASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 AC138951.2-201ENST00000623455 1161 ntBASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 BX539320.1-201ENST00000623759 877 ntBASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AC104306.2-201ENST00000451877 341 ntBASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AP001258.2-201ENST00000529891 490 ntBASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AC078819.1-201ENST00000547454 765 ntBASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AC012085.1-201ENST00000548270 765 ntBASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 RHOQP1-201ENST00000555758 579 ntBASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FNDC3AQ9Y2H6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms