Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 AC012617.1-204ENST00000586340 2305 ntBASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 AL391825.1-201ENST00000457671 1364 ntBASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPF3BQ9BZI7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 WFDC1-204ENST00000613603 549 ntBASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF3BQ9BZI7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 AC087499.6-201ENST00000411576 835 ntBASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 LRRC59-203ENST00000576448 1531 ntBASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
UPF3BQ9BZI7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms