Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 MYO15B-237ENST00000642007 4893 ntBASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 RNA5SP421-201ENST00000516864 134 ntBASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 HSPA8P5-201ENST00000456928 2069 ntBASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 AC020910.6-201ENST00000623084 1459 ntBASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHAMP1Q96JM3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 MIR943-201ENST00000401286 94 ntBASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 AC135586.1-201ENST00000539323 574 ntBASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHAMP1Q96JM3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 AL157996.1-201ENST00000624684 2299 ntBASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 KRT8P24-201ENST00000560290 1559 ntBASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 RNU1-114P-201ENST00000365297 166 ntBASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 GNAQP1-201ENST00000444815 1067 ntBASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms