Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM4P67936 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 CICP17-201ENST00000418553 2377 ntBASIC16.79■□□□□ 0.28
TPM4P67936 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM4P67936 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM4P67936 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPM4P67936 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPM4P67936 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM4P67936 SDHAP3-202ENST00000515467 728 ntBASIC16.78■□□□□ 0.28
TPM4P67936 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPM4P67936 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.78■□□□□ 0.28
TPM4P67936 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TPM4P67936 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM4P67936 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM4P67936 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.78■□□□□ 0.28
TPM4P67936 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 AC009093.7-201ENST00000623853 1223 ntBASIC16.78■□□□□ 0.28
TPM4P67936 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.78■□□□□ 0.28
TPM4P67936 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.78■□□□□ 0.28
TPM4P67936 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.78■□□□□ 0.28
TPM4P67936 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
TPM4P67936 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM4P67936 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.78■□□□□ 0.28
TPM4P67936 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM4P67936 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
TPM4P67936 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TPM4P67936 AL137783.1-201ENST00000623494 1896 ntBASIC16.78■□□□□ 0.28
TPM4P67936 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 TP73-211ENST00000604074 4806 ntTSL 5 BASIC16.77■□□□□ 0.28
TPM4P67936 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.77■□□□□ 0.28
TPM4P67936 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 AC016397.2-201ENST00000624848 1985 ntBASIC16.77■□□□□ 0.28
TPM4P67936 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 RPL37AP1-201ENST00000412502 279 ntBASIC16.77■□□□□ 0.28
TPM4P67936 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.77■□□□□ 0.28
TPM4P67936 FDX1P1-201ENST00000449115 551 ntBASIC16.77■□□□□ 0.28
TPM4P67936 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.77■□□□□ 0.28
TPM4P67936 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.77■□□□□ 0.28
TPM4P67936 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.77■□□□□ 0.28
TPM4P67936 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.77■□□□□ 0.28
TPM4P67936 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM4P67936 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.77■□□□□ 0.28
TPM4P67936 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM4P67936 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TPM4P67936 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 375.8 ms