Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CDH11P55287 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.75□□□□□ -0.21
CDH11P55287 AL589987.1-201ENST00000453380 819 ntBASIC13.75□□□□□ -0.21
CDH11P55287 RN7SL752P-201ENST00000463779 287 ntBASIC13.75□□□□□ -0.21
CDH11P55287 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH11P55287 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDH11P55287 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH11P55287 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH11P55287 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDH11P55287 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CDH11P55287 Z97205.2-201ENST00000564697 1639 ntBASIC13.75□□□□□ -0.21
CDH11P55287 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.74□□□□□ -0.21
CDH11P55287 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CDH11P55287 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CDH11P55287 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 AC055811.4-201ENST00000624039 1754 ntBASIC13.74□□□□□ -0.21
CDH11P55287 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 DGCR5-201ENST00000399539 862 ntBASIC13.74□□□□□ -0.21
CDH11P55287 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.74□□□□□ -0.21
CDH11P55287 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 AC011495.1-201ENST00000498085 584 ntBASIC13.74□□□□□ -0.21
CDH11P55287 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.74□□□□□ -0.21
CDH11P55287 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 AC023310.3-201ENST00000557027 670 ntBASIC13.74□□□□□ -0.21
CDH11P55287 AC100756.1-201ENST00000562736 682 ntBASIC13.74□□□□□ -0.21
CDH11P55287 AC138749.3-201ENST00000567691 622 ntBASIC13.74□□□□□ -0.21
CDH11P55287 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.74□□□□□ -0.21
CDH11P55287 CHCHD2P3-201ENST00000603038 451 ntBASIC13.74□□□□□ -0.21
CDH11P55287 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 AC116165.1-201ENST00000611806 668 ntBASIC13.74□□□□□ -0.21
CDH11P55287 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH11P55287 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CDH11P55287 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CDH11P55287 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH11P55287 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms