Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC5P40937 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC5P40937 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 CICP4-201ENST00000447359 2812 ntBASIC16.41■□□□□ 0.22
RFC5P40937 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 FAM45BP-202ENST00000592932 1624 ntBASIC16.41■□□□□ 0.22
RFC5P40937 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.41■□□□□ 0.22
RFC5P40937 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RFC5P40937 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFC5P40937 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFC5P40937 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC5P40937 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RFC5P40937 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC5P40937 ZNF767P-206ENST00000513792 565 ntBASIC16.41■□□□□ 0.22
RFC5P40937 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC5P40937 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC5P40937 AC244093.1-201ENST00000610837 814 ntBASIC16.41■□□□□ 0.22
RFC5P40937 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC5P40937 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC5P40937 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC5P40937 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFC5P40937 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC5P40937 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC5P40937 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC5P40937 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 SNX18-202ENST00000343017 3140 ntBASIC16.4■□□□□ 0.22
RFC5P40937 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RFC5P40937 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC5P40937 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC5P40937 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC5P40937 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RFC5P40937 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.4■□□□□ 0.22
RFC5P40937 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RFC5P40937 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.4■□□□□ 0.22
RFC5P40937 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC5P40937 CICP12-201ENST00000455801 843 ntBASIC16.4■□□□□ 0.22
RFC5P40937 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 SERPINA13P-202ENST00000478994 924 ntBASIC16.4■□□□□ 0.22
RFC5P40937 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RFC5P40937 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
RFC5P40937 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.4■□□□□ 0.22
RFC5P40937 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.4■□□□□ 0.22
RFC5P40937 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RFC5P40937 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC5P40937 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC5P40937 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RFC5P40937 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RFC5P40937 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RFC5P40937 NORAD-201ENST00000565493 5339 ntBASIC16.39■□□□□ 0.21
RFC5P40937 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RFC5P40937 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms