Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf111Q99ML9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf111Q99ML9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rnf111Q99ML9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf111Q99ML9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf111Q99ML9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Rnf111Q99ML9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf111Q99ML9 Gm13238-201ENSMUST00000117655 780 ntBASIC19.89■□□□□ 0.77
Rnf111Q99ML9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rnf111Q99ML9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf111Q99ML9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf111Q99ML9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf111Q99ML9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf111Q99ML9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf111Q99ML9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf111Q99ML9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rnf111Q99ML9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf111Q99ML9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf111Q99ML9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf111Q99ML9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf111Q99ML9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Rnf111Q99ML9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf111Q99ML9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf111Q99ML9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf111Q99ML9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf111Q99ML9 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.87■□□□□ 0.77
Rnf111Q99ML9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rnf111Q99ML9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.87■□□□□ 0.77
Rnf111Q99ML9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf111Q99ML9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf111Q99ML9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf111Q99ML9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.85■□□□□ 0.77
Rnf111Q99ML9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf111Q99ML9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.85■□□□□ 0.77
Rnf111Q99ML9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf111Q99ML9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf111Q99ML9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf111Q99ML9 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.85■□□□□ 0.77
Rnf111Q99ML9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf111Q99ML9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf111Q99ML9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf111Q99ML9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf111Q99ML9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.84■□□□□ 0.77
Rnf111Q99ML9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf111Q99ML9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf111Q99ML9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf111Q99ML9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf111Q99ML9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf111Q99ML9 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.83■□□□□ 0.77
Rnf111Q99ML9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf111Q99ML9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf111Q99ML9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.83■□□□□ 0.77
Rnf111Q99ML9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Rnf111Q99ML9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf111Q99ML9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf111Q99ML9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf111Q99ML9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf111Q99ML9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
Rnf111Q99ML9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf111Q99ML9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf111Q99ML9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf111Q99ML9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.8■□□□□ 0.76
Rnf111Q99ML9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf111Q99ML9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms