Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tram1l1Q8QZR0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tram1l1Q8QZR0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tram1l1Q8QZR0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.69■□□□□ 0.9
Tram1l1Q8QZR0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tram1l1Q8QZR0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tram1l1Q8QZR0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tram1l1Q8QZR0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tram1l1Q8QZR0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.68■□□□□ 0.9
Tram1l1Q8QZR0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.67■□□□□ 0.9
Tram1l1Q8QZR0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tram1l1Q8QZR0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tram1l1Q8QZR0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tram1l1Q8QZR0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tram1l1Q8QZR0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tram1l1Q8QZR0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Tram1l1Q8QZR0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Tram1l1Q8QZR0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tram1l1Q8QZR0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Tram1l1Q8QZR0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.66■□□□□ 0.9
Tram1l1Q8QZR0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.66■□□□□ 0.9
Tram1l1Q8QZR0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Tram1l1Q8QZR0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tram1l1Q8QZR0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tram1l1Q8QZR0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tram1l1Q8QZR0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tram1l1Q8QZR0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tram1l1Q8QZR0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.65■□□□□ 0.9
Tram1l1Q8QZR0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Tram1l1Q8QZR0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tram1l1Q8QZR0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tram1l1Q8QZR0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.64■□□□□ 0.89
Tram1l1Q8QZR0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1l1Q8QZR0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
Tram1l1Q8QZR0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tram1l1Q8QZR0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tram1l1Q8QZR0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tram1l1Q8QZR0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tram1l1Q8QZR0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tram1l1Q8QZR0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tram1l1Q8QZR0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Tram1l1Q8QZR0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tram1l1Q8QZR0 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.61■□□□□ 0.89
Tram1l1Q8QZR0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tram1l1Q8QZR0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tram1l1Q8QZR0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tram1l1Q8QZR0 Gm8493-201ENSMUST00000196881 489 ntBASIC20.61■□□□□ 0.89
Tram1l1Q8QZR0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tram1l1Q8QZR0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tram1l1Q8QZR0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tram1l1Q8QZR0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tram1l1Q8QZR0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.6■□□□□ 0.89
Tram1l1Q8QZR0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Tram1l1Q8QZR0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Tram1l1Q8QZR0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tram1l1Q8QZR0 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.6■□□□□ 0.89
Tram1l1Q8QZR0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tram1l1Q8QZR0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tram1l1Q8QZR0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tram1l1Q8QZR0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.59■□□□□ 0.89
Tram1l1Q8QZR0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.59■□□□□ 0.89
Tram1l1Q8QZR0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tram1l1Q8QZR0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tram1l1Q8QZR0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tram1l1Q8QZR0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tram1l1Q8QZR0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Tram1l1Q8QZR0 Gm43017-201ENSMUST00000198296 752 ntBASIC20.58■□□□□ 0.89
Tram1l1Q8QZR0 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms