Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP1B3P54709 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP1B3P54709 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP1B3P54709 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP1B3P54709 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP1B3P54709 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP1B3P54709 AC139795.1-202ENST00000500444 432 ntBASIC19.73■□□□□ 0.75
ATP1B3P54709 ABHD17AP5-201ENST00000580133 923 ntBASIC19.73■□□□□ 0.75
ATP1B3P54709 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP1B3P54709 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP1B3P54709 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP1B3P54709 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP1B3P54709 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP1B3P54709 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP1B3P54709 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP1B3P54709 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP1B3P54709 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP1B3P54709 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP1B3P54709 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ATP1B3P54709 AL161729.1-201ENST00000604104 1402 ntBASIC19.72■□□□□ 0.75
ATP1B3P54709 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP1B3P54709 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
ATP1B3P54709 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP1B3P54709 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP1B3P54709 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ATP1B3P54709 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP1B3P54709 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP1B3P54709 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP1B3P54709 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP1B3P54709 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ATP1B3P54709 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATP1B3P54709 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
ATP1B3P54709 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP1B3P54709 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP1B3P54709 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP1B3P54709 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP1B3P54709 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATP1B3P54709 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP1B3P54709 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATP1B3P54709 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP1B3P54709 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP1B3P54709 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP1B3P54709 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ATP1B3P54709 NTF6A-201ENST00000591175 560 ntBASIC19.7■□□□□ 0.74
ATP1B3P54709 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP1B3P54709 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP1B3P54709 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP1B3P54709 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
ATP1B3P54709 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP1B3P54709 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATP1B3P54709 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP1B3P54709 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP1B3P54709 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP1B3P54709 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP1B3P54709 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ATP1B3P54709 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP1B3P54709 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP1B3P54709 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP1B3P54709 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP1B3P54709 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ATP1B3P54709 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP1B3P54709 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.68■□□□□ 0.74
ATP1B3P54709 AC022616.5-201ENST00000518796 181 ntBASIC19.68■□□□□ 0.74
ATP1B3P54709 AC011551.1-201ENST00000614101 683 ntBASIC19.68■□□□□ 0.74
ATP1B3P54709 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP1B3P54709 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP1B3P54709 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP1B3P54709 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP1B3P54709 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP1B3P54709 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP1B3P54709 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
ATP1B3P54709 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP1B3P54709 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP1B3P54709 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP1B3P54709 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP1B3P54709 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP1B3P54709 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP1B3P54709 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
ATP1B3P54709 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP1B3P54709 DUX4L18-201ENST00000553347 1267 ntBASIC19.67■□□□□ 0.74
ATP1B3P54709 AC019171.1-201ENST00000601251 1056 ntBASIC19.67■□□□□ 0.74
ATP1B3P54709 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP1B3P54709 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP1B3P54709 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP1B3P54709 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP1B3P54709 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms