Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 ALD3YMR169C 1521 nt6.52□□□□□ -1.36
SSM4P40318 ALD2YMR170C 1521 nt6.52□□□□□ -1.36
SSM4P40318 MVD1YNR043W 1191 nt6.52□□□□□ -1.37
SSM4P40318 MNN4YKL201C 3537 nt6.52□□□□□ -1.37
SSM4P40318 EAF5YEL018W 840 nt6.51□□□□□ -1.37
SSM4P40318 COX11YPL132W 903 nt6.51□□□□□ -1.37
SSM4P40318 NOP7YGR103W 1818 nt6.51□□□□□ -1.37
SSM4P40318 CEG1YGL130W 1380 nt6.51□□□□□ -1.37
SSM4P40318 AXL2YIL140W 2472 nt6.51□□□□□ -1.37
SSM4P40318 SIR2YDL042C 1689 nt6.51□□□□□ -1.37
SSM4P40318 PRP40YKL012W 1752 nt6.51□□□□□ -1.37
SSM4P40318 SSH4YKL124W 1740 nt6.51□□□□□ -1.37
SSM4P40318 AZR1YGR224W 1842 nt6.51□□□□□ -1.37
SSM4P40318 CDC4YFL009W 2340 nt6.51□□□□□ -1.37
SSM4P40318 ARG82YDR173C 1068 nt6.5□□□□□ -1.37
SSM4P40318 YNK1YKL067W 462 nt6.5□□□□□ -1.37
SSM4P40318 TAF5YBR198C 2397 nt6.5□□□□□ -1.37
SSM4P40318 DAL81YIR023W 2913 nt6.5□□□□□ -1.37
SSM4P40318 SPR6YER115C 576 nt6.5□□□□□ -1.37
SSM4P40318 RFC2YJR068W 1062 nt6.5□□□□□ -1.37
SSM4P40318 YGP1YNL160W 1065 nt6.5□□□□□ -1.37
SSM4P40318 BUB3YOR026W 1026 nt6.5□□□□□ -1.37
SSM4P40318 SPO19YPL130W 672 nt6.5□□□□□ -1.37
SSM4P40318 HAL1YPR005C 885 nt6.5□□□□□ -1.37
SSM4P40318 RRB1YMR131C 1536 nt6.49□□□□□ -1.37
SSM4P40318 UBP9YER098W 2265 nt6.49□□□□□ -1.37
SSM4P40318 RPL15BYMR121C 615 nt6.49□□□□□ -1.37
SSM4P40318 SPS19YNL202W 879 nt6.49□□□□□ -1.37
SSM4P40318 PPG1YNR032W 1107 nt6.49□□□□□ -1.37
SSM4P40318 PDB1YBR221C 1101 nt6.49□□□□□ -1.37
SSM4P40318 UBA1YKL210W 3075 nt6.48□□□□□ -1.37
SSM4P40318 LYS5YGL154C 819 nt6.48□□□□□ -1.37
SSM4P40318 YNL057WYNL057W 333 nt6.48□□□□□ -1.37
SSM4P40318 ODC2YOR222W 924 nt6.48□□□□□ -1.37
SSM4P40318 YPL278CYPL278C 303 nt6.48□□□□□ -1.37
SSM4P40318 MSC2YDR205W 2175 nt6.48□□□□□ -1.37
SSM4P40318 KRE6YPR159W 2163 nt6.48□□□□□ -1.37
SSM4P40318 GUS1YGL245W 2127 nt6.47□□□□□ -1.37
SSM4P40318 ADK2YER170W 678 nt6.47□□□□□ -1.37
SSM4P40318 REG2YBR050C 1017 nt6.47□□□□□ -1.37
SSM4P40318 BSC5YNR069C 1470 nt6.46□□□□□ -1.37
SSM4P40318 CRT10YOL063C 2874 nt6.46□□□□□ -1.38
SSM4P40318 CPS1YJL172W 1731 nt6.46□□□□□ -1.38
SSM4P40318 ELC1YPL046C 300 nt6.46□□□□□ -1.38
SSM4P40318 HOS2YGL194C 1359 nt6.45□□□□□ -1.38
SSM4P40318 YHR214WYHR214W 612 nt6.45□□□□□ -1.38
SSM4P40318 YAR066WYAR066W 612 nt6.45□□□□□ -1.38
SSM4P40318 RDL2YOR286W 450 nt6.45□□□□□ -1.38
SSM4P40318 MAL11YGR289C 1851 nt6.45□□□□□ -1.38
SSM4P40318 MSS1YMR023C 1581 nt6.44□□□□□ -1.38
SSM4P40318 MET12YPL023C 1974 nt6.44□□□□□ -1.38
SSM4P40318 YNL217WYNL217W 981 nt6.44□□□□□ -1.38
SSM4P40318 RDL1YOR285W 420 nt6.44□□□□□ -1.38
SSM4P40318 MKS1YNL076W 1755 nt6.44□□□□□ -1.38
SSM4P40318 CPR4YCR069W 957 nt6.43□□□□□ -1.38
SSM4P40318 ICY2YPL250C 411 nt6.43□□□□□ -1.38
SSM4P40318 SRP101YDR292C 1866 nt6.43□□□□□ -1.38
SSM4P40318 EMW1YNL313C 2715 nt6.42□□□□□ -1.38
SSM4P40318 DBF4YDR052C 2115 nt6.42□□□□□ -1.38
SSM4P40318 RTC1YOL138C 4026 nt6.42□□□□□ -1.38
SSM4P40318 RRN3YKL125W 1884 nt6.42□□□□□ -1.38
SSM4P40318 YER145C-AYER145C-A 438 nt6.42□□□□□ -1.38
SSM4P40318 YLR364C-AYLR364C-A 123 nt6.42□□□□□ -1.38
SSM4P40318 YNL228WYNL228W 777 nt6.42□□□□□ -1.38
SSM4P40318 ECM7YLR443W 1347 nt6.42□□□□□ -1.38
SSM4P40318 CHL4YDR254W 1377 nt6.42□□□□□ -1.38
SSM4P40318 TPS3YMR261C 3165 nt6.41□□□□□ -1.38
SSM4P40318 PHO90YJL198W 2646 nt6.41□□□□□ -1.38
SSM4P40318 YHR182WYHR182W 2358 nt6.41□□□□□ -1.38
SSM4P40318 YMR147WYMR147W 672 nt6.41□□□□□ -1.38
SSM4P40318 TIF5YPR041W 1218 nt6.41□□□□□ -1.38
SSM4P40318 FOX2YKR009C 2703 nt6.41□□□□□ -1.38
SSM4P40318 EUG1YDR518W 1554 nt6.4□□□□□ -1.38
SSM4P40318 HXT15YDL245C 1704 nt6.4□□□□□ -1.38
SSM4P40318 HXT16YJR158W 1704 nt6.4□□□□□ -1.38
SSM4P40318 YTA12YMR089C 2478 nt6.4□□□□□ -1.38
SSM4P40318 SIT1YEL065W 1887 nt6.4□□□□□ -1.38
SSM4P40318 YLR157W-DYLR157W-D 213 nt6.4□□□□□ -1.39
SSM4P40318 FBP1YLR377C 1047 nt6.4□□□□□ -1.39
SSM4P40318 MPS3YJL019W 2049 nt6.4□□□□□ -1.39
SSM4P40318 PEX7YDR142C 1128 nt6.39□□□□□ -1.39
SSM4P40318 ISY1YJR050W 708 nt6.39□□□□□ -1.39
SSM4P40318 NKP2YLR315W 462 nt6.39□□□□□ -1.39
SSM4P40318 YML131WYML131W 1098 nt6.39□□□□□ -1.39
SSM4P40318 REI1YBR267W 1182 nt6.39□□□□□ -1.39
SSM4P40318 DPH6YLR143W 2058 nt6.39□□□□□ -1.39
SSM4P40318 TFG1YGR186W 2208 nt6.39□□□□□ -1.39
SSM4P40318 LHP1YDL051W 828 nt6.38□□□□□ -1.39
SSM4P40318 CAB3YKL088W 1716 nt6.38□□□□□ -1.39
SSM4P40318 CWC25YNL245C 540 nt6.38□□□□□ -1.39
SSM4P40318 RRP40YOL142W 723 nt6.38□□□□□ -1.39
SSM4P40318 ROG3YFR022W 2202 nt6.37□□□□□ -1.39
SSM4P40318 PTR2YKR093W 1806 nt6.37□□□□□ -1.39
SSM4P40318 HXT17YNR072W 1695 nt6.37□□□□□ -1.39
SSM4P40318 CLB4YLR210W 1383 nt6.37□□□□□ -1.39
SSM4P40318 TAF10YDR167W 621 nt6.37□□□□□ -1.39
SSM4P40318 YIL165CYIL165C 360 nt6.37□□□□□ -1.39
SSM4P40318 YAL047W-AYAL047W-A 330 nt6.37□□□□□ -1.39
SSM4P40318 AST1YBL069W 1290 nt6.37□□□□□ -1.39
SSM4P40318 YGL072CYGL072C 360 nt6.36□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms