Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YHR182WYHR182W 2358 nt7.49□□□□□ -1.21
SSN2P38931 YIR007WYIR007W 2295 nt7.49□□□□□ -1.21
SSN2P38931 CAB3YKL088W 1716 nt7.49□□□□□ -1.21
SSN2P38931 SGV1YPR161C 1974 nt7.49□□□□□ -1.21
SSN2P38931 UBX2YML013W 1755 nt7.48□□□□□ -1.21
SSN2P38931 YDR133CYDR133C 336 nt7.48□□□□□ -1.21
SSN2P38931 NAT2YGR147C 867 nt7.48□□□□□ -1.21
SSN2P38931 FBP1YLR377C 1047 nt7.48□□□□□ -1.21
SSN2P38931 MTF1YMR228W 1026 nt7.48□□□□□ -1.21
SSN2P38931 BUB3YOR026W 1026 nt7.48□□□□□ -1.21
SSN2P38931 YGL072CYGL072C 360 nt7.47□□□□□ -1.21
SSN2P38931 TIP41YPR040W 1071 nt7.47□□□□□ -1.21
SSN2P38931 GCR1YPL075W 2358 nt7.47□□□□□ -1.21
SSN2P38931 RGT1YKL038W 3513 nt7.47□□□□□ -1.21
SSN2P38931 YAL047W-AYAL047W-A 330 nt7.46□□□□□ -1.21
SSN2P38931 SWC3YAL011W 1878 nt7.46□□□□□ -1.22
SSN2P38931 MNT2YGL257C 1677 nt7.46□□□□□ -1.22
SSN2P38931 ARO80YDR421W 2853 nt7.46□□□□□ -1.22
SSN2P38931 YDL228CYDL228C 642 nt7.45□□□□□ -1.22
SSN2P38931 ATH1YPR026W 3636 nt7.45□□□□□ -1.22
SSN2P38931 YIL001WYIL001W 1542 nt7.45□□□□□ -1.22
SSN2P38931 HEL1YKR017C 1656 nt7.44□□□□□ -1.22
SSN2P38931 CRT10YOL063C 2874 nt7.44□□□□□ -1.22
SSN2P38931 YDL121CYDL121C 450 nt7.44□□□□□ -1.22
SSN2P38931 YOR131CYOR131C 657 nt7.44□□□□□ -1.22
SSN2P38931 YNR065CYNR065C 3351 nt7.43□□□□□ -1.22
SSN2P38931 YDR545C-AYDR545C-A 480 nt7.43□□□□□ -1.22
SSN2P38931 IRC22YEL001C 678 nt7.43□□□□□ -1.22
SSN2P38931 YEL077W-AYEL077W-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YER190C-BYER190C-B 483 nt7.43□□□□□ -1.22
SSN2P38931 YFL068WYFL068W 483 nt7.43□□□□□ -1.22
SSN2P38931 YGR296C-BYGR296C-B 483 nt7.43□□□□□ -1.22
SSN2P38931 YHL050W-AYHL050W-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YHR219C-AYHR219C-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YIL177W-AYIL177W-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YJL225W-AYJL225W-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YLL066W-AYLL066W-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YLL067W-AYLL067W-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YLR466C-AYLR466C-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YLR467C-AYLR467C-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YML133W-BYML133W-B 483 nt7.43□□□□□ -1.22
SSN2P38931 YNL339W-BYNL339W-B 483 nt7.43□□□□□ -1.22
SSN2P38931 YBL113W-AYBL113W-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YOR396C-AYOR396C-A 483 nt7.43□□□□□ -1.22
SSN2P38931 YPL283W-BYPL283W-B 483 nt7.43□□□□□ -1.22
SSN2P38931 YPR204C-AYPR204C-A 483 nt7.43□□□□□ -1.22
SSN2P38931 MCM2YBL023C 2607 nt7.42□□□□□ -1.22
SSN2P38931 YTA12YMR089C 2478 nt7.42□□□□□ -1.22
SSN2P38931 YMR221CYMR221C 1515 nt7.42□□□□□ -1.22
SSN2P38931 SMC5YOL034W 3282 nt7.42□□□□□ -1.22
SSN2P38931 OCA4YCR095C 1089 nt7.42□□□□□ -1.22
SSN2P38931 IMD2YHR216W 1572 nt7.42□□□□□ -1.22
SSN2P38931 LSG1YGL099W 1923 nt7.41□□□□□ -1.22
SSN2P38931 YJL215CYJL215C 360 nt7.4□□□□□ -1.22
SSN2P38931 CYM1YDR430C 2970 nt7.39□□□□□ -1.23
SSN2P38931 SGE1YPR198W 1632 nt7.39□□□□□ -1.23
SSN2P38931 RPL19AYBR084C-A 570 nt7.39□□□□□ -1.23
SSN2P38931 JHD2YJR119C 2187 nt7.39□□□□□ -1.23
SSN2P38931 FLC1YPL221W 2382 nt7.39□□□□□ -1.23
SSN2P38931 HIS4YCL030C 2400 nt7.39□□□□□ -1.23
SSN2P38931 KCC4YCL024W 3114 nt7.39□□□□□ -1.23
SSN2P38931 SUP56tL(CAA)A 82 nt7.38□□□□□ -1.23
SSN2P38931 SUP53tL(CAA)C 82 nt7.38□□□□□ -1.23
SSN2P38931 tL(CAA)DtL(CAA)D 82 nt7.38□□□□□ -1.23
SSN2P38931 tL(CAA)G1tL(CAA)G1 82 nt7.38□□□□□ -1.23
SSN2P38931 SUP54tL(CAA)G2 82 nt7.38□□□□□ -1.23
SSN2P38931 tL(CAA)G3tL(CAA)G3 82 nt7.38□□□□□ -1.23
SSN2P38931 tL(CAA)KtL(CAA)K 82 nt7.38□□□□□ -1.23
SSN2P38931 tL(CAA)LtL(CAA)L 82 nt7.38□□□□□ -1.23
SSN2P38931 tL(CAA)MtL(CAA)M 82 nt7.38□□□□□ -1.23
SSN2P38931 tL(CAA)NtL(CAA)N 82 nt7.38□□□□□ -1.23
SSN2P38931 CNB1YKL190W 528 nt7.38□□□□□ -1.23
SSN2P38931 ATG26YLR189C 3597 nt7.38□□□□□ -1.23
SSN2P38931 YER158CYER158C 1722 nt7.38□□□□□ -1.23
SSN2P38931 ADY3YDL239C 2373 nt7.38□□□□□ -1.23
SSN2P38931 AXL2YIL140W 2472 nt7.37□□□□□ -1.23
SSN2P38931 EUG1YDR518W 1554 nt7.37□□□□□ -1.23
SSN2P38931 KEX1YGL203C 2190 nt7.36□□□□□ -1.23
SSN2P38931 PPG1YNR032W 1107 nt7.36□□□□□ -1.23
SSN2P38931 RPS4BYHR203C 786 nt7.35□□□□□ -1.23
SSN2P38931 HPM1YIL110W 1134 nt7.35□□□□□ -1.23
SSN2P38931 RPS4AYJR145C 786 nt7.35□□□□□ -1.23
SSN2P38931 YLR407WYLR407W 687 nt7.35□□□□□ -1.23
SSN2P38931 FRE3YOR381W 2136 nt7.35□□□□□ -1.23
SSN2P38931 MAL13YGR288W 1422 nt7.35□□□□□ -1.23
SSN2P38931 FLO8YER109C 2400 nt7.35□□□□□ -1.23
SSN2P38931 MPS3YJL019W 2049 nt7.35□□□□□ -1.23
SSN2P38931 BUD17YNR027W 954 nt7.35□□□□□ -1.23
SSN2P38931 KIN2YLR096W 3444 nt7.34□□□□□ -1.23
SSN2P38931 MSK1YNL073W 1731 nt7.34□□□□□ -1.23
SSN2P38931 HNT2YDR305C 654 nt7.34□□□□□ -1.23
SSN2P38931 tQ(UUG)CtQ(UUG)C 72 nt7.34□□□□□ -1.23
SSN2P38931 tQ(UUG)D1tQ(UUG)D1 72 nt7.34□□□□□ -1.23
SSN2P38931 tQ(UUG)D2tQ(UUG)D2 72 nt7.34□□□□□ -1.23
SSN2P38931 tQ(UUG)D3tQ(UUG)D3 72 nt7.34□□□□□ -1.23
SSN2P38931 tQ(UUG)E1tQ(UUG)E1 72 nt7.34□□□□□ -1.23
SSN2P38931 tQ(UUG)HtQ(UUG)H 72 nt7.34□□□□□ -1.23
SSN2P38931 tQ(UUG)LtQ(UUG)L 72 nt7.34□□□□□ -1.23
SSN2P38931 AST1YBL069W 1290 nt7.34□□□□□ -1.23
SSN2P38931 DAL81YIR023W 2913 nt7.33□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 39.6 ms