Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Vti1bO88384 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vti1bO88384 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.47■□□□□ 0.71
Vti1bO88384 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vti1bO88384 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vti1bO88384 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vti1bO88384 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vti1bO88384 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vti1bO88384 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vti1bO88384 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vti1bO88384 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.46■□□□□ 0.71
Vti1bO88384 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.46■□□□□ 0.71
Vti1bO88384 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vti1bO88384 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vti1bO88384 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.45■□□□□ 0.7
Vti1bO88384 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vti1bO88384 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vti1bO88384 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vti1bO88384 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vti1bO88384 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vti1bO88384 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vti1bO88384 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vti1bO88384 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vti1bO88384 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.43■□□□□ 0.7
Vti1bO88384 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vti1bO88384 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vti1bO88384 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vti1bO88384 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Vti1bO88384 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
Vti1bO88384 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Vti1bO88384 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.42■□□□□ 0.7
Vti1bO88384 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vti1bO88384 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vti1bO88384 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vti1bO88384 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vti1bO88384 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vti1bO88384 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vti1bO88384 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.41■□□□□ 0.7
Vti1bO88384 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vti1bO88384 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vti1bO88384 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vti1bO88384 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vti1bO88384 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Vti1bO88384 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vti1bO88384 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vti1bO88384 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vti1bO88384 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vti1bO88384 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vti1bO88384 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vti1bO88384 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vti1bO88384 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vti1bO88384 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Vti1bO88384 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vti1bO88384 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vti1bO88384 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.39■□□□□ 0.69
Vti1bO88384 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.39■□□□□ 0.69
Vti1bO88384 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.39■□□□□ 0.69
Vti1bO88384 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vti1bO88384 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.39■□□□□ 0.69
Vti1bO88384 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vti1bO88384 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vti1bO88384 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vti1bO88384 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Vti1bO88384 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.38■□□□□ 0.69
Vti1bO88384 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.38■□□□□ 0.69
Vti1bO88384 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vti1bO88384 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vti1bO88384 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vti1bO88384 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vti1bO88384 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vti1bO88384 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vti1bO88384 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vti1bO88384 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vti1bO88384 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vti1bO88384 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vti1bO88384 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vti1bO88384 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vti1bO88384 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.36■□□□□ 0.69
Vti1bO88384 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.36■□□□□ 0.69
Vti1bO88384 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vti1bO88384 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms