Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPXO76031 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.67■□□□□ 0.9
CLPXO76031 PKD1P6-201ENST00000343738 4769 ntBASIC20.67■□□□□ 0.9
CLPXO76031 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLPXO76031 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPXO76031 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLPXO76031 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPXO76031 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPXO76031 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPXO76031 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLPXO76031 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLPXO76031 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLPXO76031 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPXO76031 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPXO76031 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CLPXO76031 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPXO76031 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLPXO76031 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPXO76031 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPXO76031 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLPXO76031 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLPXO76031 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.65■□□□□ 0.9
CLPXO76031 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.65■□□□□ 0.9
CLPXO76031 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPXO76031 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPXO76031 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.65■□□□□ 0.9
CLPXO76031 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.65■□□□□ 0.9
CLPXO76031 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLPXO76031 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.64■□□□□ 0.9
CLPXO76031 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLPXO76031 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLPXO76031 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPXO76031 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.64■□□□□ 0.89
CLPXO76031 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLPXO76031 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.64■□□□□ 0.89
CLPXO76031 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPXO76031 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLPXO76031 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLPXO76031 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPXO76031 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPXO76031 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPXO76031 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLPXO76031 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLPXO76031 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CLPXO76031 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.63■□□□□ 0.89
CLPXO76031 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLPXO76031 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.63■□□□□ 0.89
CLPXO76031 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLPXO76031 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLPXO76031 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLPXO76031 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPXO76031 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CLPXO76031 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPXO76031 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPXO76031 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLPXO76031 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPXO76031 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPXO76031 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPXO76031 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLPXO76031 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.62■□□□□ 0.89
CLPXO76031 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLPXO76031 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPXO76031 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLPXO76031 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLPXO76031 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLPXO76031 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLPXO76031 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLPXO76031 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.61■□□□□ 0.89
CLPXO76031 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.6■□□□□ 0.89
CLPXO76031 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.6■□□□□ 0.89
CLPXO76031 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLPXO76031 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
CLPXO76031 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPXO76031 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.59■□□□□ 0.89
CLPXO76031 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPXO76031 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPXO76031 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.59■□□□□ 0.89
CLPXO76031 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPXO76031 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLPXO76031 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPXO76031 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.59■□□□□ 0.89
CLPXO76031 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPXO76031 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLPXO76031 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.58■□□□□ 0.89
CLPXO76031 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLPXO76031 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLPXO76031 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.58■□□□□ 0.89
CLPXO76031 MIR6089-201ENST00000616698 64 ntBASIC20.58■□□□□ 0.89
CLPXO76031 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLPXO76031 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLPXO76031 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms