Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PRAMEF11O60813 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PRAMEF11O60813 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRAMEF11O60813 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRAMEF11O60813 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRAMEF11O60813 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRAMEF11O60813 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRAMEF11O60813 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.34■■□□□ 1.33
PRAMEF11O60813 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PRAMEF11O60813 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.34■■□□□ 1.33
PRAMEF11O60813 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRAMEF11O60813 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRAMEF11O60813 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PRAMEF11O60813 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PRAMEF11O60813 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.33■■□□□ 1.33
PRAMEF11O60813 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.33■■□□□ 1.33
PRAMEF11O60813 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.33■■□□□ 1.33
PRAMEF11O60813 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PRAMEF11O60813 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PRAMEF11O60813 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PRAMEF11O60813 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PRAMEF11O60813 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF11O60813 ALDH1A3-203ENST00000557963 1670 ntBASIC23.32■■□□□ 1.32
PRAMEF11O60813 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF11O60813 AC093323.1-202ENST00000635031 2045 ntBASIC23.32■■□□□ 1.32
PRAMEF11O60813 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.32■■□□□ 1.32
PRAMEF11O60813 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
PRAMEF11O60813 KRT16P3-201ENST00000439127 1283 ntBASIC23.32■■□□□ 1.32
PRAMEF11O60813 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PRAMEF11O60813 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.32■■□□□ 1.32
PRAMEF11O60813 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF11O60813 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF11O60813 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF11O60813 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF11O60813 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF11O60813 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF11O60813 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.31■■□□□ 1.32
PRAMEF11O60813 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PRAMEF11O60813 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF11O60813 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.3■■□□□ 1.32
PRAMEF11O60813 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.3■■□□□ 1.32
PRAMEF11O60813 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.3■■□□□ 1.32
PRAMEF11O60813 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PRAMEF11O60813 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.3■■□□□ 1.32
PRAMEF11O60813 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.3■■□□□ 1.32
PRAMEF11O60813 AL356441.2-201ENST00000443009 864 ntBASIC23.3■■□□□ 1.32
PRAMEF11O60813 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.3■■□□□ 1.32
PRAMEF11O60813 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRAMEF11O60813 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.3■■□□□ 1.32
PRAMEF11O60813 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF11O60813 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF11O60813 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF11O60813 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.29■■□□□ 1.32
PRAMEF11O60813 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.29■■□□□ 1.32
PRAMEF11O60813 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.29■■□□□ 1.32
PRAMEF11O60813 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF11O60813 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF11O60813 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.28■■□□□ 1.32
PRAMEF11O60813 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.28■■□□□ 1.32
PRAMEF11O60813 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.28■■□□□ 1.32
PRAMEF11O60813 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.28■■□□□ 1.32
PRAMEF11O60813 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.28■■□□□ 1.32
PRAMEF11O60813 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF11O60813 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF11O60813 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF11O60813 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.27■■□□□ 1.32
PRAMEF11O60813 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.27■■□□□ 1.32
PRAMEF11O60813 MIR6724-1-201ENST00000616420 92 ntBASIC23.27■■□□□ 1.32
PRAMEF11O60813 MIR6724-2-201ENST00000616483 92 ntBASIC23.27■■□□□ 1.32
PRAMEF11O60813 MIR6724-4-201ENST00000617390 92 ntBASIC23.27■■□□□ 1.32
PRAMEF11O60813 MIR6724-3-201ENST00000622482 92 ntBASIC23.27■■□□□ 1.32
PRAMEF11O60813 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF11O60813 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF11O60813 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF11O60813 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF11O60813 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF11O60813 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PRAMEF11O60813 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PRAMEF11O60813 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.26■■□□□ 1.31
PRAMEF11O60813 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF11O60813 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PRAMEF11O60813 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF11O60813 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF11O60813 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF11O60813 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF11O60813 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF11O60813 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.25■■□□□ 1.31
PRAMEF11O60813 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF11O60813 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PRAMEF11O60813 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.25■■□□□ 1.31
PRAMEF11O60813 ABCB10P4-201ENST00000566803 2184 ntBASIC23.25■■□□□ 1.31
PRAMEF11O60813 AC005703.6-201ENST00000623265 1329 ntBASIC23.25■■□□□ 1.31
PRAMEF11O60813 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF11O60813 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF11O60813 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PRAMEF11O60813 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.24■■□□□ 1.31
PRAMEF11O60813 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PRAMEF11O60813 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRAMEF11O60813 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRAMEF11O60813 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms