Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh12O55134 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh12O55134 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh12O55134 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh12O55134 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh12O55134 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Pcdh12O55134 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh12O55134 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh12O55134 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh12O55134 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh12O55134 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh12O55134 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.58■□□□□ 0.57
Pcdh12O55134 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdh12O55134 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh12O55134 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdh12O55134 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdh12O55134 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh12O55134 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh12O55134 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh12O55134 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdh12O55134 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh12O55134 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh12O55134 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh12O55134 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh12O55134 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh12O55134 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdh12O55134 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh12O55134 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh12O55134 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh12O55134 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh12O55134 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh12O55134 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.57■□□□□ 0.56
Pcdh12O55134 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh12O55134 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdh12O55134 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh12O55134 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdh12O55134 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh12O55134 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdh12O55134 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
Pcdh12O55134 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.56■□□□□ 0.56
Pcdh12O55134 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdh12O55134 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh12O55134 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh12O55134 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh12O55134 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh12O55134 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdh12O55134 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.55■□□□□ 0.56
Pcdh12O55134 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh12O55134 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh12O55134 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.54■□□□□ 0.56
Pcdh12O55134 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdh12O55134 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh12O55134 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.53■□□□□ 0.56
Pcdh12O55134 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdh12O55134 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh12O55134 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh12O55134 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh12O55134 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdh12O55134 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.52■□□□□ 0.56
Pcdh12O55134 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh12O55134 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh12O55134 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh12O55134 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh12O55134 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh12O55134 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh12O55134 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh12O55134 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.51■□□□□ 0.55
Pcdh12O55134 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.51■□□□□ 0.55
Pcdh12O55134 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdh12O55134 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh12O55134 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh12O55134 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdh12O55134 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdh12O55134 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh12O55134 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdh12O55134 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh12O55134 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdh12O55134 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh12O55134 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh12O55134 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms