Protein–RNA interactions for Protein: C9J4A7

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9J4A7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
C9J4A7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C9J4A7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
C9J4A7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.55■■□□□ 1.04
C9J4A7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C9J4A7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.55■■□□□ 1.04
C9J4A7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C9J4A7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
C9J4A7 DUX4L19-201ENST00000557448 1267 ntBASIC21.55■■□□□ 1.04
C9J4A7 AL136162.1-201ENST00000607711 1078 ntBASIC21.55■■□□□ 1.04
C9J4A7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.55■■□□□ 1.04
C9J4A7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.55■■□□□ 1.04
C9J4A7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
C9J4A7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.55■■□□□ 1.04
C9J4A7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C9J4A7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
C9J4A7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C9J4A7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C9J4A7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C9J4A7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.54■■□□□ 1.04
C9J4A7 MIR935-201ENST00000401179 91 ntBASIC21.54■■□□□ 1.04
C9J4A7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.54■■□□□ 1.04
C9J4A7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
C9J4A7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C9J4A7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C9J4A7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C9J4A7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C9J4A7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
C9J4A7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
C9J4A7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.53■■□□□ 1.04
C9J4A7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C9J4A7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.53■■□□□ 1.04
C9J4A7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.53■■□□□ 1.04
C9J4A7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C9J4A7 AC135279.3-201ENST00000610945 1311 ntBASIC21.53■■□□□ 1.04
C9J4A7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
C9J4A7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.52■■□□□ 1.04
C9J4A7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
C9J4A7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
C9J4A7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
C9J4A7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.52■■□□□ 1.04
C9J4A7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.52■■□□□ 1.03
C9J4A7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.51■■□□□ 1.03
C9J4A7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
C9J4A7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
C9J4A7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
C9J4A7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.51■■□□□ 1.03
C9J4A7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
C9J4A7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
C9J4A7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
C9J4A7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
C9J4A7 AC142381.2-201ENST00000566120 298 ntBASIC21.5■■□□□ 1.03
C9J4A7 HLA-L-211ENST00000482052 1765 ntBASIC21.5■■□□□ 1.03
C9J4A7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
C9J4A7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
C9J4A7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
C9J4A7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.49■■□□□ 1.03
C9J4A7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.49■■□□□ 1.03
C9J4A7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
C9J4A7 SYT6-210ENST00000641643 1587 ntBASIC21.48■■□□□ 1.03
C9J4A7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
C9J4A7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
C9J4A7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
C9J4A7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
C9J4A7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C9J4A7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
C9J4A7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
C9J4A7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C9J4A7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C9J4A7 AC024257.2-201ENST00000549699 147 ntBASIC21.47■■□□□ 1.03
C9J4A7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C9J4A7 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.47■■□□□ 1.03
C9J4A7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C9J4A7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.47■■□□□ 1.03
C9J4A7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C9J4A7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.47■■□□□ 1.03
C9J4A7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.46■■□□□ 1.03
C9J4A7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
C9J4A7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C9J4A7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
C9J4A7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.46■■□□□ 1.03
C9J4A7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
C9J4A7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.46■■□□□ 1.03
C9J4A7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
C9J4A7 AC009102.2-201ENST00000606772 1639 ntBASIC21.46■■□□□ 1.03
C9J4A7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C9J4A7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
C9J4A7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
C9J4A7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.45■■□□□ 1.02
C9J4A7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
C9J4A7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
C9J4A7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
C9J4A7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.45■■□□□ 1.02
C9J4A7 EDA-201ENST00000338901 1233 ntBASIC21.45■■□□□ 1.02
C9J4A7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
C9J4A7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
C9J4A7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.45■■□□□ 1.02
C9J4A7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.45■■□□□ 1.02
C9J4A7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
C9J4A7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms