Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 MIR6816-201ENST00000620368 66 ntBASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 AC233280.19-201ENST00000633223 136 ntBASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 MARK2P16-201ENST00000605714 1723 ntBASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS13BQ7Z7G8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AL929302.1-201ENST00000426556 871 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 MIR4472-1-201ENST00000584349 80 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC144831.1-201ENST00000573312 2656 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 RPL35P9-201ENST00000446059 350 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 CTBP2P6-201ENST00000526402 1229 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 OR5BD1P-201ENST00000532527 817 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 MIR5001-201ENST00000580185 100 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC055811.3-201ENST00000584952 686 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC006116.2-201ENST00000589958 988 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC010976.2-201ENST00000609697 852 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 ACTG1P19-201ENST00000418987 1116 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 CICP6-201ENST00000457191 2729 ntBASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13BQ7Z7G8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 OR10N1P-201ENST00000392758 869 ntBASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13BQ7Z7G8 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms