Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.99□□□□□ -0.17
CTNSO60931 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.99□□□□□ -0.17
CTNSO60931 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
CTNSO60931 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.99□□□□□ -0.17
CTNSO60931 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.99□□□□□ -0.17
CTNSO60931 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CTNSO60931 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.99□□□□□ -0.17
CTNSO60931 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.99□□□□□ -0.17
CTNSO60931 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CTNSO60931 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.99□□□□□ -0.17
CTNSO60931 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.99□□□□□ -0.17
CTNSO60931 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.99□□□□□ -0.17
CTNSO60931 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CTNSO60931 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CTNSO60931 AC023908.3-201ENST00000564211 3047 ntBASIC13.99□□□□□ -0.17
CTNSO60931 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 MRPL37P1-201ENST00000592451 1337 ntBASIC13.98□□□□□ -0.17
CTNSO60931 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.98□□□□□ -0.17
CTNSO60931 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 CHMP1AP1-201ENST00000445563 662 ntBASIC13.98□□□□□ -0.17
CTNSO60931 AL355994.2-201ENST00000447882 704 ntBASIC13.98□□□□□ -0.17
CTNSO60931 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.98□□□□□ -0.17
CTNSO60931 PPY2P-201ENST00000582808 702 ntBASIC13.98□□□□□ -0.17
CTNSO60931 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.98□□□□□ -0.17
CTNSO60931 AL008721.1-201ENST00000609964 604 ntBASIC13.98□□□□□ -0.17
CTNSO60931 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 KRT8P4-201ENST00000509735 1454 ntBASIC13.98□□□□□ -0.17
CTNSO60931 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 AC106881.1-201ENST00000605849 3329 ntBASIC13.98□□□□□ -0.17
CTNSO60931 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.98□□□□□ -0.17
CTNSO60931 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTNSO60931 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.98□□□□□ -0.17
CTNSO60931 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CTNSO60931 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 OR2I1P-209ENST00000641730 5365 ntBASIC13.97□□□□□ -0.17
CTNSO60931 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 AC009093.2-202ENST00000620513 2079 ntBASIC13.97□□□□□ -0.17
CTNSO60931 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms