Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AC011840.2-201ENST00000563063 1520 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 INE2-201ENST00000630399 1874 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 RN7SKP230-201ENST00000365642 335 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 MIR1202-201ENST00000408529 83 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AC026954.1-201ENST00000429771 1293 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AL391280.1-201ENST00000506969 1062 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AC106820.3-201ENST00000561653 397 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 OR10B1P-201ENST00000601666 907 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AC138696.2-201ENST00000607376 223 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AL021578.1-201ENST00000613646 709 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 AHCYP2-201ENST00000430630 1300 ntBASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI2Q9Y5P3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AC079316.1-201ENST00000548397 411 ntBASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AC020910.5-201ENST00000623668 1865 ntBASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms