Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 NHP2-202ENST00000314397 599 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.93■□□□□ 0.78
PHF8Q9UPP1 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 AC092580.1-201ENST00000433998 658 ntBASIC19.93■□□□□ 0.78
PHF8Q9UPP1 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 AC140113.1-201ENST00000603467 169 ntBASIC19.93■□□□□ 0.78
PHF8Q9UPP1 AC002472.4-201ENST00000641915 272 ntBASIC19.93■□□□□ 0.78
PHF8Q9UPP1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF8Q9UPP1 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.92■□□□□ 0.78
PHF8Q9UPP1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 AC026691.1-201ENST00000602502 2017 ntBASIC19.92■□□□□ 0.78
PHF8Q9UPP1 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 OR8T1P-201ENST00000421347 918 ntBASIC19.92■□□□□ 0.78
PHF8Q9UPP1 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 RN7SL357P-201ENST00000581065 298 ntBASIC19.92■□□□□ 0.78
PHF8Q9UPP1 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 RNF146-211ENST00000609447 607 ntTSL 4 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 AC006504.5-208ENST00000588784 2401 ntBASIC19.92■□□□□ 0.78
PHF8Q9UPP1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.92■□□□□ 0.78
PHF8Q9UPP1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 PCDHA1-201ENST00000378133 2726 ntBASIC19.91■□□□□ 0.78
PHF8Q9UPP1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms