Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 HOMER2P2-201ENST00000451621 847 ntBASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 AC026434.2-201ENST00000506094 1078 ntBASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 MIR4525-201ENST00000580000 75 ntBASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 KRT8P44-201ENST00000441609 1350 ntBASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 AC023024.2-201ENST00000623561 1993 ntBASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 GRK6P1-201ENST00000400595 1711 ntBASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 AC104581.4-201ENST00000623126 3052 ntBASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 AC005912.2-201ENST00000619492 2400 ntBASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 GOLGA2P4-201ENST00000441462 777 ntBASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 CNN2P10-201ENST00000443067 918 ntBASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 AP006547.1-201ENST00000563435 692 ntBASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 AC091271.1-201ENST00000611877 1162 ntBASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 GPR182-203ENST00000622922 591 ntBASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 FGD5P1-202ENST00000614866 2498 ntBASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.74■□□□□ 0.43
CLIP2Q9UDT6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 PFN1P12-201ENST00000455938 534 ntBASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 AC022494.1-201ENST00000466044 728 ntBASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 COX5BP1-201ENST00000507622 393 ntBASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 FAM86HP-204ENST00000513466 959 ntBASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 C2orf69P2-201ENST00000562032 1123 ntBASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.73■□□□□ 0.43
CLIP2Q9UDT6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms