Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 KLF2P2-201ENST00000416807 1039 ntBASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 ARSEP1-201ENST00000420443 635 ntBASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 GIMAP3P-201ENST00000495150 836 ntBASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 ENPP7P5-201ENST00000541031 1031 ntBASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 AL359711.2-201ENST00000563105 872 ntBASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 AKR1B10P2-201ENST00000577332 927 ntBASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 AC133539.2-201ENST00000604757 467 ntBASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 TMEM261P1-201ENST00000604899 340 ntBASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NEUROD4Q9HD90 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AC015656.1-201ENST00000624209 3578 ntBASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AC098614.1-201ENST00000368528 745 ntBASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 ACTBP8-201ENST00000403258 1108 ntBASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 TLE1P1-201ENST00000422965 589 ntBASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AC022447.6-201ENST00000515522 438 ntBASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 IGHV3-71-201ENST00000523324 359 ntBASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 MIR8072-201ENST00000614241 80 ntBASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 AP001267.2-201ENST00000532619 2086 ntBASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.16□□□□□ -0.14
NEUROD4Q9HD90 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 LRRC59-203ENST00000576448 1531 ntBASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms