Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RIPK4P57078 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.47■□□□□ 0.71
RIPK4P57078 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RIPK4P57078 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.47■□□□□ 0.71
RIPK4P57078 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RIPK4P57078 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC19.47■□□□□ 0.71
RIPK4P57078 AC104306.2-201ENST00000451877 341 ntBASIC19.47■□□□□ 0.71
RIPK4P57078 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.47■□□□□ 0.71
RIPK4P57078 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.47■□□□□ 0.71
RIPK4P57078 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.47■□□□□ 0.71
RIPK4P57078 FAM8A2P-201ENST00000528813 1142 ntBASIC19.47■□□□□ 0.71
RIPK4P57078 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.47■□□□□ 0.71
RIPK4P57078 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.47■□□□□ 0.71
RIPK4P57078 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 DUX4L46-201ENST00000566845 751 ntBASIC19.47■□□□□ 0.71
RIPK4P57078 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.47■□□□□ 0.71
RIPK4P57078 AC009955.4-201ENST00000597192 544 ntBASIC19.47■□□□□ 0.71
RIPK4P57078 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.47■□□□□ 0.71
RIPK4P57078 AC008825.2-201ENST00000603374 718 ntBASIC19.47■□□□□ 0.71
RIPK4P57078 AL118558.3-201ENST00000607414 1079 ntBASIC19.47■□□□□ 0.71
RIPK4P57078 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RIPK4P57078 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.47■□□□□ 0.71
RIPK4P57078 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.47■□□□□ 0.71
RIPK4P57078 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RIPK4P57078 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC19.46■□□□□ 0.71
RIPK4P57078 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RIPK4P57078 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RIPK4P57078 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.46■□□□□ 0.71
RIPK4P57078 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.46■□□□□ 0.71
RIPK4P57078 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.46■□□□□ 0.71
RIPK4P57078 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.46■□□□□ 0.71
RIPK4P57078 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.46■□□□□ 0.71
RIPK4P57078 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 CICP12-201ENST00000455801 843 ntBASIC19.46■□□□□ 0.71
RIPK4P57078 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.46■□□□□ 0.71
RIPK4P57078 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.46■□□□□ 0.71
RIPK4P57078 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.46■□□□□ 0.71
RIPK4P57078 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK4P57078 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.7
RIPK4P57078 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
RIPK4P57078 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC19.45■□□□□ 0.7
RIPK4P57078 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RIPK4P57078 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RIPK4P57078 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.45■□□□□ 0.7
RIPK4P57078 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.45■□□□□ 0.7
RIPK4P57078 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.45■□□□□ 0.7
RIPK4P57078 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RIPK4P57078 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.45■□□□□ 0.7
RIPK4P57078 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.45■□□□□ 0.7
RIPK4P57078 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms