Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AP000845.1-201ENST00000581677 2131 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AC012508.2-201ENST00000567613 1472 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AL645937.2-201ENST00000396808 931 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AL139094.1-201ENST00000405549 1188 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 C2orf27AP3-201ENST00000434123 579 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 SNX29P1-201ENST00000548357 1007 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AL354718.3-201ENST00000616414 581 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 MIR6869-201ENST00000619434 62 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CR382287.1-201ENST00000623954 586 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AGAP7P-201ENST00000582299 2062 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AGAP14-201ENST00000624701 2060 ntBASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
RPH3AQ9Y2J0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 PDIA3P1-201ENST00000471856 1510 ntBASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms