Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RN7SL596P-201ENST00000582123 288 ntBASIC19.97■□□□□ 0.79
PHF8Q9UPP1 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 AC244250.3-201ENST00000620749 366 ntBASIC19.97■□□□□ 0.79
PHF8Q9UPP1 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 LTB4R2-202ENST00000528054 3092 ntBASIC19.97■□□□□ 0.79
PHF8Q9UPP1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 AC139712.1-201ENST00000378256 1875 ntBASIC19.96■□□□□ 0.79
PHF8Q9UPP1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 RN7SKP109-201ENST00000410592 316 ntBASIC19.96■□□□□ 0.79
PHF8Q9UPP1 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 ERP29P1-201ENST00000442902 706 ntBASIC19.96■□□□□ 0.79
PHF8Q9UPP1 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 MTND2P7-201ENST00000521337 640 ntBASIC19.96■□□□□ 0.79
PHF8Q9UPP1 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 MIR4472-1-201ENST00000584349 80 ntBASIC19.96■□□□□ 0.79
PHF8Q9UPP1 MIR2392-201ENST00000584881 84 ntBASIC19.96■□□□□ 0.79
PHF8Q9UPP1 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 AC009145.4-201ENST00000625119 1294 ntBASIC19.96■□□□□ 0.79
PHF8Q9UPP1 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.96■□□□□ 0.79
PHF8Q9UPP1 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
PHF8Q9UPP1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 MIR645-201ENST00000385283 94 ntBASIC19.95■□□□□ 0.78
PHF8Q9UPP1 GCSHP3-201ENST00000431120 391 ntBASIC19.95■□□□□ 0.78
PHF8Q9UPP1 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 DNM1P51-201ENST00000558149 522 ntBASIC19.95■□□□□ 0.78
PHF8Q9UPP1 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 AC007250.1-201ENST00000608934 338 ntBASIC19.95■□□□□ 0.78
PHF8Q9UPP1 AC073592.2-201ENST00000623062 780 ntBASIC19.95■□□□□ 0.78
PHF8Q9UPP1 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF8Q9UPP1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF8Q9UPP1 AC093909.3-201ENST00000504783 336 ntBASIC19.94■□□□□ 0.78
PHF8Q9UPP1 AC068867.1-201ENST00000559855 150 ntBASIC19.94■□□□□ 0.78
PHF8Q9UPP1 AC011247.3-201ENST00000603297 438 ntBASIC19.94■□□□□ 0.78
PHF8Q9UPP1 AL451007.2-201ENST00000632004 563 ntBASIC19.94■□□□□ 0.78
PHF8Q9UPP1 AL118508.1-201ENST00000613502 2345 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms