Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 ACTG1P2-201ENST00000415776 1125 ntBASIC16.05■□□□□ 0.16
NXF3Q9H4D5 ACTG1P11-201ENST00000425411 1125 ntBASIC16.05■□□□□ 0.16
NXF3Q9H4D5 FAM58BP-201ENST00000439056 645 ntBASIC16.05■□□□□ 0.16
NXF3Q9H4D5 AC012441.2-201ENST00000444843 739 ntBASIC16.05■□□□□ 0.16
NXF3Q9H4D5 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 AC008805.1-201ENST00000590892 364 ntBASIC16.05■□□□□ 0.16
NXF3Q9H4D5 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 AC027601.3-201ENST00000622907 509 ntBASIC16.05■□□□□ 0.16
NXF3Q9H4D5 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 NFIC-211ENST00000641145 8399 ntBASIC16.05■□□□□ 0.16
NXF3Q9H4D5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NXF3Q9H4D5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 AL136172.1-201ENST00000598590 1394 ntBASIC16.04■□□□□ 0.16
NXF3Q9H4D5 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 MARK2P5-201ENST00000507649 634 ntBASIC16.04■□□□□ 0.16
NXF3Q9H4D5 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 AL160314.3-201ENST00000556041 767 ntBASIC16.04■□□□□ 0.16
NXF3Q9H4D5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 AC091544.8-201ENST00000619490 361 ntBASIC16.04■□□□□ 0.16
NXF3Q9H4D5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NXF3Q9H4D5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 AC136759.1-202ENST00000530858 2194 ntBASIC16.03■□□□□ 0.16
NXF3Q9H4D5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NXF3Q9H4D5 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.03■□□□□ 0.16
NXF3Q9H4D5 AC011742.3-201ENST00000439053 820 ntBASIC16.03■□□□□ 0.16
NXF3Q9H4D5 AL645933.1-201ENST00000440087 609 ntBASIC16.03■□□□□ 0.16
NXF3Q9H4D5 RN7SL11P-201ENST00000471305 293 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms