Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC24.8■■□□□ 1.56
CUX2O14529 AC007881.1-201ENST00000437460 187 ntBASIC24.8■■□□□ 1.56
CUX2O14529 RN7SL767P-201ENST00000493013 295 ntBASIC24.8■■□□□ 1.56
CUX2O14529 GCOM2-201ENST00000509133 1104 ntBASIC24.8■■□□□ 1.56
CUX2O14529 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC24.8■■□□□ 1.56
CUX2O14529 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CUX2O14529 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CUX2O14529 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CUX2O14529 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CUX2O14529 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
CUX2O14529 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CUX2O14529 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
CUX2O14529 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC24.79■■□□□ 1.56
CUX2O14529 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC24.79■■□□□ 1.56
CUX2O14529 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC24.79■■□□□ 1.56
CUX2O14529 AC091304.3-201ENST00000566500 716 ntBASIC24.79■■□□□ 1.56
CUX2O14529 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC24.79■■□□□ 1.56
CUX2O14529 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC24.79■■□□□ 1.56
CUX2O14529 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC24.79■■□□□ 1.56
CUX2O14529 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CUX2O14529 AC005274.1-201ENST00000623460 802 ntBASIC24.79■■□□□ 1.56
CUX2O14529 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CUX2O14529 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CUX2O14529 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CUX2O14529 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC24.79■■□□□ 1.56
CUX2O14529 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC24.79■■□□□ 1.56
CUX2O14529 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CUX2O14529 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC24.79■■□□□ 1.56
CUX2O14529 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC24.79■■□□□ 1.56
CUX2O14529 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CUX2O14529 RPL4P6-201ENST00000438116 1304 ntBASIC24.79■■□□□ 1.56
CUX2O14529 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CUX2O14529 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC24.79■■□□□ 1.56
CUX2O14529 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CUX2O14529 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC24.78■■□□□ 1.56
CUX2O14529 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CUX2O14529 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC24.78■■□□□ 1.56
CUX2O14529 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CUX2O14529 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CUX2O14529 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CUX2O14529 HNRNPA1P2-207ENST00000432375 960 ntBASIC24.78■■□□□ 1.56
CUX2O14529 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC24.78■■□□□ 1.56
CUX2O14529 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC24.78■■□□□ 1.56
CUX2O14529 TREX1-203ENST00000456089 629 ntTSL 3 BASIC24.78■■□□□ 1.56
CUX2O14529 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC24.78■■□□□ 1.56
CUX2O14529 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CUX2O14529 AC004923.3-201ENST00000527532 355 ntBASIC24.78■■□□□ 1.56
CUX2O14529 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC24.78■■□□□ 1.56
CUX2O14529 AC005746.3-201ENST00000614751 393 ntBASIC24.78■■□□□ 1.56
CUX2O14529 AC079328.2-201ENST00000561241 3354 ntBASIC24.78■■□□□ 1.56
CUX2O14529 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CUX2O14529 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC24.78■■□□□ 1.56
CUX2O14529 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CUX2O14529 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC24.78■■□□□ 1.56
CUX2O14529 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC24.78■■□□□ 1.56
CUX2O14529 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CUX2O14529 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC24.77■■□□□ 1.56
CUX2O14529 AP000354.1-201ENST00000396982 456 ntBASIC24.77■■□□□ 1.56
CUX2O14529 TLE1P1-201ENST00000422965 589 ntBASIC24.77■■□□□ 1.56
CUX2O14529 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC24.77■■□□□ 1.56
CUX2O14529 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC24.77■■□□□ 1.56
CUX2O14529 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 MST1L-204ENST00000545160 559 ntTSL 4 BASIC24.77■■□□□ 1.56
CUX2O14529 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC24.77■■□□□ 1.56
CUX2O14529 KRT8P2-201ENST00000556193 944 ntBASIC24.77■■□□□ 1.56
CUX2O14529 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CUX2O14529 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC24.77■■□□□ 1.56
CUX2O14529 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC24.77■■□□□ 1.56
CUX2O14529 BX322534.1-201ENST00000635574 241 ntBASIC24.77■■□□□ 1.56
CUX2O14529 AC215524.1-201ENST00000635696 241 ntBASIC24.77■■□□□ 1.56
CUX2O14529 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC24.77■■□□□ 1.56
CUX2O14529 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
CUX2O14529 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC24.77■■□□□ 1.56
CUX2O14529 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC24.77■■□□□ 1.56
CUX2O14529 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
CUX2O14529 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
CUX2O14529 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CUX2O14529 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC24.77■■□□□ 1.56
CUX2O14529 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC24.77■■□□□ 1.56
CUX2O14529 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC24.77■■□□□ 1.56
CUX2O14529 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC24.77■■□□□ 1.56
CUX2O14529 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC24.77■■□□□ 1.56
CUX2O14529 RN7SL277P-201ENST00000481521 288 ntBASIC24.77■■□□□ 1.56
CUX2O14529 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms