Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FOXN3O00409 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 AC245100.3-201ENST00000441281 285 ntBASIC16.01■□□□□ 0.15
FOXN3O00409 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 RN7SL837P-201ENST00000463010 287 ntBASIC16.01■□□□□ 0.15
FOXN3O00409 RN7SL752P-201ENST00000463779 287 ntBASIC16.01■□□□□ 0.15
FOXN3O00409 MESTP3-201ENST00000503460 968 ntBASIC16.01■□□□□ 0.15
FOXN3O00409 AC068587.3-201ENST00000526613 355 ntBASIC16.01■□□□□ 0.15
FOXN3O00409 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
FOXN3O00409 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
FOXN3O00409 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXN3O00409 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXN3O00409 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXN3O00409 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
FOXN3O00409 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXN3O00409 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FOXN3O00409 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXN3O00409 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
FOXN3O00409 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
FOXN3O00409 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXN3O00409 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 AC098614.1-201ENST00000368528 745 ntBASIC16■□□□□ 0.15
FOXN3O00409 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16■□□□□ 0.15
FOXN3O00409 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16■□□□□ 0.15
FOXN3O00409 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 AC106760.1-201ENST00000508690 800 ntBASIC16■□□□□ 0.15
FOXN3O00409 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16■□□□□ 0.15
FOXN3O00409 AP001889.1-201ENST00000525414 633 ntBASIC16■□□□□ 0.15
FOXN3O00409 AC131206.1-201ENST00000538078 1211 ntBASIC16■□□□□ 0.15
FOXN3O00409 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16■□□□□ 0.15
FOXN3O00409 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16■□□□□ 0.15
FOXN3O00409 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16■□□□□ 0.15
FOXN3O00409 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 ENPP7P14-201ENST00000621765 1040 ntBASIC16■□□□□ 0.15
FOXN3O00409 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16■□□□□ 0.15
FOXN3O00409 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
FOXN3O00409 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
FOXN3O00409 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXN3O00409 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXN3O00409 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXN3O00409 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXN3O00409 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FOXN3O00409 OR2I1P-210ENST00000642037 4691 ntBASIC15.99■□□□□ 0.15
FOXN3O00409 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
FOXN3O00409 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXN3O00409 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXN3O00409 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXN3O00409 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
FOXN3O00409 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXN3O00409 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
FOXN3O00409 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms