Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 HTR7P1-202ENST00000624664 4411 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 MARK2P17-201ENST00000498560 841 ntBASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 COG6-212ENST00000630730 186 ntTSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 AC138627.1-201ENST00000641127 1257 ntBASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 REXO1L2P-201ENST00000425429 2069 ntBASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 AC104581.1-202ENST00000635932 2618 ntBASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL25A1Q9BXS0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 RPS6-201ENST00000315377 863 ntTSL 3 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 AC000077.1-201ENST00000420012 953 ntBASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 RPSAP12-201ENST00000435879 888 ntBASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 AL136084.1-201ENST00000449172 318 ntBASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 HNRNPA1P7-201ENST00000521273 963 ntBASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 AL121992.3-201ENST00000606186 346 ntBASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 AC022296.3-201ENST00000608823 403 ntBASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms