Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FAM90A16P-201ENST00000526662 1395 ntBASIC12.11□□□□□ -0.47
VPS13CQ709C8 FAM90A9P-201ENST00000527940 1395 ntBASIC12.11□□□□□ -0.47
VPS13CQ709C8 FAM90A5P-201ENST00000528738 1395 ntBASIC12.11□□□□□ -0.47
VPS13CQ709C8 FAM90A14P-201ENST00000530386 1395 ntBASIC12.11□□□□□ -0.47
VPS13CQ709C8 FAM90A13P-201ENST00000534703 1395 ntBASIC12.11□□□□□ -0.47
VPS13CQ709C8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13CQ709C8 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13CQ709C8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.11□□□□□ -0.47
VPS13CQ709C8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VPS13CQ709C8 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.11□□□□□ -0.47
VPS13CQ709C8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13CQ709C8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.11□□□□□ -0.47
VPS13CQ709C8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13CQ709C8 BAK1P1-201ENST00000317045 636 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 BCL2L12P1-201ENST00000508390 733 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AC097359.2-201ENST00000604992 2389 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AL162727.3-201ENST00000635661 2787 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 SNX15-201ENST00000352068 771 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AL592076.1-201ENST00000424448 303 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 CHCHD2P2-201ENST00000503744 321 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 HERC2P11-201ENST00000562845 725 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 AC100756.2-201ENST00000569537 736 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AC008536.3-201ENST00000623282 1599 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 KRT18P37-201ENST00000520711 1282 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 AC007326.1-201ENST00000604539 458 ntBASIC12.1□□□□□ -0.47
VPS13CQ709C8 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
VPS13CQ709C8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13CQ709C8 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 AC092580.1-201ENST00000433998 658 ntBASIC12.09□□□□□ -0.47
VPS13CQ709C8 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 RPL35P9-201ENST00000446059 350 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms