Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.8□□□□□ -0.2
CLDN20P56880 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CLDN20P56880 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 AC079776.1-201ENST00000401540 1152 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.8□□□□□ -0.2
CLDN20P56880 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLDN20P56880 AC112492.5-201ENST00000421897 457 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 AC012441.1-201ENST00000446669 685 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 BCRP2-202ENST00000447763 634 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 AC022137.2-201ENST00000503482 481 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 BCRP6-201ENST00000510112 632 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 BCRP7-201ENST00000511549 544 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 AP001889.1-201ENST00000525414 633 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 HILS1-202ENST00000545329 423 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.8□□□□□ -0.2
CLDN20P56880 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN20P56880 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 AP005019.2-201ENST00000615104 511 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN20P56880 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN20P56880 MIR600HG-201ENST00000449175 5984 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLDN20P56880 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN20P56880 AC027601.5-201ENST00000624065 2482 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
CLDN20P56880 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.79□□□□□ -0.2
CLDN20P56880 RNU1-114P-201ENST00000365297 166 ntBASIC13.79□□□□□ -0.2
CLDN20P56880 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 GK-202ENST00000378941 458 ntTSL 3 BASIC13.79□□□□□ -0.2
CLDN20P56880 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.79□□□□□ -0.2
CLDN20P56880 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.79□□□□□ -0.2
CLDN20P56880 CROCCP4-201ENST00000457096 498 ntBASIC13.79□□□□□ -0.2
CLDN20P56880 AC106760.1-201ENST00000508690 800 ntBASIC13.79□□□□□ -0.2
CLDN20P56880 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.79□□□□□ -0.2
CLDN20P56880 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CLDN20P56880 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 AC023024.2-201ENST00000623561 1993 ntBASIC13.79□□□□□ -0.2
CLDN20P56880 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CLDN20P56880 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CLDN20P56880 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN20P56880 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN20P56880 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN20P56880 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms