Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN1P35523 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLCN1P35523 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN1P35523 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN1P35523 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN1P35523 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 INE2-201ENST00000630399 1874 ntBASIC17.12■□□□□ 0.33
CLCN1P35523 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLCN1P35523 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN1P35523 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CLCN1P35523 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 AC211486.1-202ENST00000416371 468 ntBASIC17.12■□□□□ 0.33
CLCN1P35523 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN1P35523 AL139010.1-201ENST00000454878 894 ntBASIC17.12■□□□□ 0.33
CLCN1P35523 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN1P35523 AC211476.1-201ENST00000503899 468 ntBASIC17.12■□□□□ 0.33
CLCN1P35523 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
CLCN1P35523 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN1P35523 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN1P35523 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN1P35523 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLCN1P35523 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN1P35523 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN1P35523 AC138969.3-201ENST00000546612 1459 ntBASIC17.12■□□□□ 0.33
CLCN1P35523 AC138932.2-201ENST00000548268 1459 ntBASIC17.12■□□□□ 0.33
CLCN1P35523 AC126755.4-201ENST00000549796 1459 ntBASIC17.12■□□□□ 0.33
CLCN1P35523 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCN1P35523 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLCN1P35523 CICP1-201ENST00000416803 2410 ntBASIC17.11■□□□□ 0.33
CLCN1P35523 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCN1P35523 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN1P35523 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN1P35523 MTATP6P19-201ENST00000413797 659 ntBASIC17.11■□□□□ 0.33
CLCN1P35523 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN1P35523 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN1P35523 RBPMS2P1-201ENST00000437762 623 ntBASIC17.11■□□□□ 0.33
CLCN1P35523 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN1P35523 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN1P35523 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN1P35523 AC004835.2-201ENST00000603762 682 ntBASIC17.11■□□□□ 0.33
CLCN1P35523 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLCN1P35523 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLCN1P35523 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN1P35523 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN1P35523 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN1P35523 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN1P35523 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 SPDYE14P-201ENST00000442619 822 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms